Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01216 ATGGCAACCCTGCCGGTCAAAGTGCTTGATGTTTGCCATGTTCCTCCGTGGCCTTCATCTTCTGTGACTGAGTTATCTCTCCCTCTTACTTTCTTTGATTTATTCTGGTTAAGATTCCATGCAATTGAGCGTGTCTTCTTCTACTCACTTCCTGAAGCAGATGATGACACTTACTTCTTTGACTCCGTAGTTCCAAAACTCAAACACTCACTCTCTGTTACCCTCCAACACTTTTTTCCCCTTGCTGGGAATATCGTTTGGCCTGAAGAATCCGAAAAACCCTTCATCAGATATAGTCCAGGAGATAGCGTTTCATTCACTGTGTCACAGTCTGACGCAGACTTCAACAACATCTCAAGCTCTGGTACACGAGAAGCCATAGCGTCCCGCTCCATTGTACCCCACTTGCACACATCTAAGACCAGCACTTCTCTACTGGCACTGCAGGTGACTTTGTTTCCCAAGAAAGGTTTTTCCATTGGAATTGCAACCCACCATGCAATTCTTGATGGGAAATCTTCTACCATGTTTATGAAGGCATGGGCCTATTTATGCCGAGAGACCGAGGAAGAAACCAGCTCCGGGTCCTTGGTGAAAGAACTGAGACCATTCCTTGAGCGTAGTGTTATCAAAGACCCGAATGGTCTCTATTCGAATTATTTGAATTTATGGGTCAAAATGCCCATTGCAGCTGGCTCTGTTGTCAACAATGTTAACAAAAGCGTTGAGATTTTGCCTGAGTTCGGAACGCCCAGCAAAGAATTATTGGTGCAGACAACATTTAAGCTGAGGCGCAAGGCTATAGAGAAGTTAAGGGAGACGGTGCTATCCCTTTGGTACAAGGTTAGCAAAGAGGACAGTAAACAAGAAAAGCCAGTCAAGCTGTCAACTTTTGTGCTTACTTGTGCTCATATGCTGGTTTGCATTGCTAAAGCTGCACAACTGGAAGAAAGCAAGAAGATCTTATTTTCATTTACAGCTGATTGCAGGGCCAGATTAGAGCCACCTATTGATCCAAACTACTTAGGTAATTGTGTTTCAGGTTGTATGGTAATGATCGAACATGACGAAGTTTACAGTGAAGATGGGGTAGTCTTTGTTTCTAAGAAACTTTGTGATGAGATAGAGAATTTGGAGAAGGATGCACTGGGTAGAGTAGCGTCTGCAGGAGAATTTTGGAGTTCTATGGCATCAGCAGGACATCGAATTATCGCGGTAGCAGGATCGCCGCGTTTTGGTGTTTATGAGACAAATTTTGGATGGGGGAAGCCTGACAAGGTGGAGATAGCATCAGTATACAGAGGTGGAGCACTTGCATTAGCTGAAAGTAGAGATGGAGATGGAGTTGAAATTGGTTATGTTTGTACTCAGCATGAGATGGGCATCTTAGCTGATGAATTCTACAATTGCCTACACGCGTAA 1422 0.4402 MATLPVKVLDVCHVPPWPSSSVTELSLPLTFFDLFWLRFHAIERVFFYSLPEADDDTYFFDSVVPKLKHSLSVTLQHFFPLAGNIVWPEESEKPFIRYSPGDSVSFTVSQSDADFNNISSSGTREAIASRSIVPHLHTSKTSTSLLALQVTLFPKKGFSIGIATHHAILDGKSSTMFMKAWAYLCRETEEETSSGSLVKELRPFLERSVIKDPNGLYSNYLNLWVKMPIAAGSVVNNVNKSVEILPEFGTPSKELLVQTTFKLRRKAIEKLRETVLSLWYKVSKEDSKQEKPVKLSTFVLTCAHMLVCIAKAAQLEESKKILFSFTADCRARLEPPIDPNYLGNCVSGCMVMIEHDEVYSEDGVVFVSKKLCDEIENLEKDALGRVASAGEFWSSMASAGHRIIAVAGSPRFGVYETNFGWGKPDKVEIASVYRGGALALAESRDGDGVEIGYVCTQHEMGILADEFYNCLHA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01216 473 Gene3D - 6 234 IPR023213 -
Pte1g01216 473 SUPERFAMILY CoA-dependent acyltransferases 293 444 - -
Pte1g01216 473 Pfam Transferase family 18 468 - -
Pte1g01216 473 Gene3D - 254 472 IPR023213 -
Pte1g01216 473 PANTHER - 6 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01216 Pte-Chr1 33270839 33272260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01216 33 424 Monolignol Biosynthesis Gene Families AT5G48930 23.399 1.48e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01216 - - qsa:O6P43_004395 432.95