Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01210 ATGTTTCCACGATTACTGCTCACTTTAATCTTCACCATTTGCTTCGCATCTTTGACTAGCAGAGCTGCTGTTTTACCAGGTGAAGAAGTTAAAGCTTTACAAGATATAGCCAAGACAATGGGGAAGAAGGATTGGGACTTCAGTGTAGATCCTTGCAGTGGGAAGAACGGATGGAGTATGCCTAAGTTGAGAGGGTATGAGAATGCTGTCACCTGCAATTGTTCGTTTGACAATGGCAAAGTCTGCCATTTGGTCAGCATAGTTTTGAAATCACAGTCCCTTCCAGGAAAGCTGCCACCAGAATTGGCTAGGTTGCCTTACCTCTACGAAATTGACCTTGCTCACAACTACCTCAACGGGTCAATCCCTCCAGAATGGGGCTCACTGAAGCTTCAAAATATTTCCCTACTTGGAAATCGAATTTCAGGTCCAATCCCTAAAGAATTGGGAAACATTACCACTCTCAAAAGTTTGGTTCTAGAGTACAACCAATTGTCTGAAAATCTTCCTCCAGAACTAGGAAAACTCCCCCAGATTGAAAGAATATTTCTGACCTCAAACTATCTCACTGGGGAACTACCTGCAACTTTTGGAGAATTGACCACATTGAAGGACTTCCGAATCGGCGATAACCAATTTTCTGGGAAGATACCTAGCTTCATTAAGAGCTGGACGATTCTGGACAAACTGGTGATTCAAGCAAGTGGTTTCAGTGGGCCAATTCCTGCTGAAGTTTCCCTCTTGGAAAACTTGAGTGACCTGAGAATTAGTGATTTGGATGGACCAAACTCAACATTTCCACTAGTCATTAATATGAGCAATTTGAACACACTAATTCTTAAGAGTTGTAATATCAATGGGTCACTACCTCAATACCTTGGAACAATGACAAGCCTAAGAACCTTAGACTTGAGCTTTAACAAATTGACTGGAGGAATTCCAAGCAGCTTCATTGGCCTAACAAATGTGGTATACTTGTATTTAACTGGAAATATGCTAACTGGAACGGTGCCTGGCTGGATATTGAAAGACACCAACAATGTAGATGTTTCATACAACAATTTTGATTTAAAAAGTTCAGAAACTTTACCTTGCCAGGCGCAGAGCAGCGTGAACCTCTTTAAAAGCTCTTTCGAGGGAACAGACTCTGGGATTCTTTCTTGCATGGGGAGTTCTCAATGTCCTAAAAATTGGTACTCTCTACGTATCAATTGTGGTGGAAAAGAAGTAATTGTCAATGGAAGTCAAGCATATGAAAGTGATCTCAGTACAGCTGGAGCAGCAACTTTTGTCGAGAGTAGAACTAACTGGGCATTGAGCAACACTGGCAACTTTTTGGACGATGATCGACCATTTTTCTCCTATACCTGGTCGAATTCATCTGTACTTTCCATGCCAAATGCTGAACTTTACATGACTGCACGCATATCTCCACTTTCTATGACTTACTATGCCTTTTGCTTGATGAATGGAAGCTACATAGTGAACCTGCACTTTGCAGAGATTATGTTCACCGATGATTTATCATATAGAAGTATAGGAAGGCGCATGTTTGACGTCTACATTCAGGGTAAACGTCTATTAAAGGATTTTAATATTGTAAAAGAAGCTGGAGGCGCCGGTAAGGCAGTCATAAAAACTTTTACTGCTGCTGTTAGTAATTCAACCTTGGAGATTCGCTTATATTGGGCGGGAAGAGGGACAACAGGTGTACCATATAAAGGAGTGTATGGTCCTCTTATCTCTGCTATTTCTGTGGATCCTGATTTTATACCTCCAAATGAGAATAGCCACAGACCAGTTGCTGTGATCTTAGCAATTGTGATCCCAGGAGCCACTTTTCTCCTCCTAGTTTTAGTTTTCCTTTGGTGGAAATTCTGCCGACAACCAGAAAGTAAACTACAAAAAGAGCTCAAGGATTTAGACCTGCAAATTGGTTCATTCACATTACGACAAATTAAAGCAGCCACGGATCAATTTAATGATGAAAACAAGATTGGAGGAGGAGGTTTTGGTCCTGTTTACAAGGGTATTTTGTCAGATGGTAGAGTTGTGGCAGTTAAACAGCTTTCTTCCAATTCAAGCCAAGGGAATCGCGAGTTTCTAAATGAGATAGGCATGATATCAGCCCTGCAACATCCAAATCTTGTTAAGCTCTATGGATGCTGTGTTGAGGGAGATCAGTTGTTACTTGTATATGAATACATGGAAAACAATAGCCTTGCCCGTGCTTTGTTTCACCCAGAACAAAGCCAATTGAACTTGGATTGGTCAACAAGGTGCAAGATCTGTACCGGAATAGCAAAAGGCTTGGCATTTTTGCATGAGGAATCAAGACTGAAAATTGTTCACAGAGACATTAAAGCAACGAATGTGCTGCTTGATAAAGATCTTAACCCCAAAATTTCTGATTTTGGCTTGGCTAAACTTGATGAAGGTGGTAAAACCCACATAAGCACCAGGATAGCTGGGACATATGGATATATGGCACCTGAGTATGCTATGCGAGGTCATTTAACTTACAAAGCAGATGTCTATAGCTTTGGAGTTGTTGCTTTGGAAATTGTAAGCGGGAGGAGCAACAATAGTGTTAAACAGTCCAACGGGGAAAGCTTTTATCTTCTTGATTGGGCACTACTGTTGGAAGAGAAAGGAAACTTGTTGGAGCTCGTGGATCCAATGTTGGGTTCAGACTTCAATGAAATGGAAGCTATAGCAATGCTCAATGTTGCTCTCTTATGCACTTGTGAATCTCCAGCAGCTAGGCCAAGCATGTCTATTGTGGTAAGCATGCTTGAAGGCAAAACTGCAATTCAAAAACCAATTGCAGATTCCGGGGATAAAGTGAATGAATTGAAGTTGGAAGCAATGAGGAAGTGTTTCTATGCAATAGGAAATAATAAAGAAATTCCAATTCACGTGACTAATGTTGCAGGCATAGAAGATGACTCTGCCGAAAAGCAGGTAATGAGTTTGCCTTGTACTGCTGCTTGTACTTCCAGGTTGAGAGAGAATAGTGCACAAGAGATGACACTGTTGGAAAAAGCTGATACCATTTAG 3060 0.4114 MFPRLLLTLIFTICFASLTSRAAVLPGEEVKALQDIAKTMGKKDWDFSVDPCSGKNGWSMPKLRGYENAVTCNCSFDNGKVCHLVSIVLKSQSLPGKLPPELARLPYLYEIDLAHNYLNGSIPPEWGSLKLQNISLLGNRISGPIPKELGNITTLKSLVLEYNQLSENLPPELGKLPQIERIFLTSNYLTGELPATFGELTTLKDFRIGDNQFSGKIPSFIKSWTILDKLVIQASGFSGPIPAEVSLLENLSDLRISDLDGPNSTFPLVINMSNLNTLILKSCNINGSLPQYLGTMTSLRTLDLSFNKLTGGIPSSFIGLTNVVYLYLTGNMLTGTVPGWILKDTNNVDVSYNNFDLKSSETLPCQAQSSVNLFKSSFEGTDSGILSCMGSSQCPKNWYSLRINCGGKEVIVNGSQAYESDLSTAGAATFVESRTNWALSNTGNFLDDDRPFFSYTWSNSSVLSMPNAELYMTARISPLSMTYYAFCLMNGSYIVNLHFAEIMFTDDLSYRSIGRRMFDVYIQGKRLLKDFNIVKEAGGAGKAVIKTFTAAVSNSTLEIRLYWAGRGTTGVPYKGVYGPLISAISVDPDFIPPNENSHRPVAVILAIVIPGATFLLLVLVFLWWKFCRQPESKLQKELKDLDLQIGSFTLRQIKAATDQFNDENKIGGGGFGPVYKGILSDGRVVAVKQLSSNSSQGNREFLNEIGMISALQHPNLVKLYGCCVEGDQLLLVYEYMENNSLARALFHPEQSQLNLDWSTRCKICTGIAKGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEGGKTHISTRIAGTYGYMAPEYAMRGHLTYKADVYSFGVVALEIVSGRSNNSVKQSNGESFYLLDWALLLEEKGNLLELVDPMLGSDFNEMEAIAMLNVALLCTCESPAARPSMSIVVSMLEGKTAIQKPIADSGDKVNELKLEAMRKCFYAIGNNKEIPIHVTNVAGIEDDSAEKQVMSLPCTAACTSRLRENSAQEMTLLEKADTI* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01210 1019 SUPERFAMILY Protein kinase-like (PK-like) 643 933 IPR011009 -
Pte1g01210 1019 ProSiteProfiles Protein kinase domain profile. 660 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01210 1019 Gene3D Phosphorylase Kinase; domain 1 625 735 - -
Pte1g01210 1019 FunFam Leucine-rich repeat transmembrane protein kinase 196 401 - -
Pte1g01210 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 398 589 - -
Pte1g01210 1019 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 944 - -
Pte1g01210 1019 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 31 193 - -
Pte1g01210 1019 Gene3D - 397 588 - -
Pte1g01210 1019 SUPERFAMILY L domain-like 73 355 - -
Pte1g01210 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Pte1g01210 1019 Gene3D Ribonuclease Inhibitor 26 262 IPR032675 -
Pte1g01210 1019 Pfam Leucine rich repeat 273 333 IPR001611 GO:0005515
Pte1g01210 1019 Pfam Malectin domain 400 584 IPR021720 -
Pte1g01210 1019 Pfam Protein kinase domain 660 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01210 1019 Gene3D Ribonuclease Inhibitor 263 375 IPR032675 -
Pte1g01210 1019 CDD STKc_IRAK 666 934 - -
Pte1g01210 1019 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 735 - -
Pte1g01210 1019 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 956 - -
Pte1g01210 1019 SMART serkin_6 660 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01210 1019 Gene3D Transferase(Phosphotransferase) domain 1 736 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01210 Pte-Chr1 33154542 33162761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01210 13 986 Receptor kinase-like Gene Family AT1G53420 54.888 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte1g01210 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01210 - - qsa:O6P43_001072 1295.41