Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01208 ATGAAGATTCAGTGTAACGTGTGCGAAGCAGCAGAAGCTAAGGTTTTCTGTTGTGCAGATGAGGCTGCTTTGTGTTGTGAATGTGACAAGAAGATTCACGCTGCAAACAAGCTTGCAAGTAAGCATTTGAGGGTTCCATTGTCAAGATCTTCATCTCAGATGCCTAAGTGCGATATATGTCAGGATGCAGTGGGCTATTTCTTCTGTCTAGAAGATCGTGCATTATTCTGCAGAAAATGTGATGTTGCTATACACACTGTAAATTCATTTGTGTCTGCTCATCAGAGGTTTCTACTTACTGGTGTAAAAGTTGGTCTGGCATCTACCGATCCCAGTGCTTCCACTTCATCAGTTAAGTCTCATTCTGTGGAGATGCTGTCAGAGACAAAATCTCCCATCTCCAGAAAGACTCTCTCTGTAGCTATGTCGTCTGAGCAAAATGAGTCATTGCCTATCCACAATGTTGGAGTTGGGGAGTTTAGACCAGTTAAGCTTTCATATACTGGTGGTTCTATGGCTGGAAGTACTCCACAATGGCCTTTAGATGAATTTTTTGGGCTGAGTGATTTTTCTCAGAGTTCTAATTACATGGACTATGGATCATCTCAGGCTGACAGTGGGAAGCTTGGAGAATCTGATTCTTCATTGTTAATATCCGGCGACGAAGAATTAGACGATGATGAACGCTTGGGTTGCGTTCCAGATGCTTCTTGGACAGTGCCAGAGATTCCCTCCCCTCCTACAGCCTCAGGGTTATATTGGCCCGCAAACCCTCACTTTCCATTCTATAGCACAATGTTTATTCCTGACATGAAAAAACGCAATGATCTTTGGCATGTTAGTGGCCGTAGATCAAGAACCCCTCGGCAATTTTAG 876 0.4349 MKIQCNVCEAAEAKVFCCADEAALCCECDKKIHAANKLASKHLRVPLSRSSSQMPKCDICQDAVGYFFCLEDRALFCRKCDVAIHTVNSFVSAHQRFLLTGVKVGLASTDPSASTSSVKSHSVEMLSETKSPISRKTLSVAMSSEQNESLPIHNVGVGEFRPVKLSYTGGSMAGSTPQWPLDEFFGLSDFSQSSNYMDYGSSQADSGKLGESDSSLLISGDEELDDDERLGCVPDASWTVPEIPSPPTASGLYWPANPHFPFYSTMFIPDMKKRNDLWHVSGRRSRTPRQF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01208 291 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 259 - -
Pte1g01208 291 Pfam B-box zinc finger 53 94 IPR000315 GO:0008270
Pte1g01208 291 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pte1g01208 291 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pte1g01208 291 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pte1g01208 291 CDD Bbox1_BBX-like 5 47 - -
Pte1g01208 291 FunFam B-box zinc finger protein 22 1 93 - -
Pte1g01208 291 Gene3D Classic Zinc Finger 1 93 - -
Pte1g01208 291 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte1g01208 291 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01208 Pte-Chr1 33140623 33147838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01208 1 271 C2C2-CO-like Transcription Factor Family AT1G78600 49.169 2.08e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g01208 zf-B_box 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01208 - - qsa:O6P43_001094 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01208 1 33140623 33147838 Pte1g01208 1 33140623 33147838 RCT