Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01206 GCCTTATACATAACAATATGTGTCGTTGCCTTTGTTGTGTCTAAGATCATTATATCAGTCCTTCTTTATAAACGATGGAAACGTAAGCAGATGATACAAGTAGATGGCTTCTCAGACATGCTTTTGAAGAAGACACTGAAACTGAGAAACAAGGACATCATTGGTTCTGGGGGTTATGGCATCGTTTATAAATTGACAGTTGATGACTCCACAGCCTTAGCTGTGAAAAGACTGACTAGAGGGACTGCAGATAGAGACCGAGGTTTTGAGAGAGAGCTACAAGCCATGGCAGACATTAAGCACCGCAACATTGTGACACTTCATGGATATTACACTGCGTCTCACTATAATCTTCTTATCTATGAGCTAATGCCAAATGGAAGCTTAGATGCCGCTTTGCATGGTAAGACTAAGCTTTTGGATTGGCCGTCAAGATATAAAATAGCAGTAGGTGCAGCTAGAGGTATTTCATACCTTCATCATGATTGCATTCCACACATAATCCATAGAGATATCAAGACAAGCAATATCTTGCTGGATCACAATATGGAGGCTAGAGTTTCTGATTTTGGGCTAGCCACGTTGATGGAACCAGACAAAACTCATGTTTCAACATTTGTTGCTGGGACTTTTGGATATCTGGCTCCAGAATATTTTGATACTGGGAGAGCAACAGCAAAAGGTGATGTCTACAGTTTTGGGGTGGTGTTACTCGAACTTATCACAGGGAAGAAACCTACTAATGAATCCTTCATGGAACAGGGAACAAAGCTTGTCACATGGGTTAAGGCAGTTGTTCAAGGGAAGAGGGAGGAACAAGTACTTGACAGTAGTTTAGAGAATTGTCCAGTTGATGAGGTTAAGAATGTATTCAACATTGCATTTATGTGCCTTGAACCAGAGCCTTCAAATAGGCCAACCATGGCACAAGTTGTCAATATGCTTGAACACATCAAA 957 0.4096 ALYITICVVAFVVSKIIISVLLYKRWKRKQMIQVDGFSDMLLKKTLKLRNKDIIGSGGYGIVYKLTVDDSTALAVKRLTRGTADRDRGFERELQAMADIKHRNIVTLHGYYTASHYNLLIYELMPNGSLDAALHGKTKLLDWPSRYKIAVGAARGISYLHHDCIPHIIHRDIKTSNILLDHNMEARVSDFGLATLMEPDKTHVSTFVAGTFGYLAPEYFDTGRATAKGDVYSFGVVLLELITGKKPTNESFMEQGTKLVTWVKAVVQGKREEQVLDSSLENCPVDEVKNVFNIAFMCLEPEPSNRPTMAQVVNMLEHIK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01206 319 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 124 319 - -
Pte1g01206 319 FunFam Receptor-like serine/threonine-protein kinase 21 123 - -
Pte1g01206 319 SUPERFAMILY Protein kinase-like (PK-like) 45 316 IPR011009 -
Pte1g01206 319 Pfam Protein kinase domain 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01206 319 Gene3D Transferase(Phosphotransferase) domain 1 124 319 - -
Pte1g01206 319 SMART serkin_6 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01206 319 ProSiteProfiles Protein kinase domain profile. 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01206 319 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 319 - -
Pte1g01206 319 PIRSF ILK 25 319 - -
Pte1g01206 319 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Pte1g01206 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pte1g01206 319 Gene3D Phosphorylase Kinase; domain 1 18 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01206 Pte-Chr1 33128255 33129982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01206 41 316 Receptor kinase-like Gene Family AT2G35620 51.087 1.14e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pte1g01206 Pkinase 5.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01206 - - cave:132175212 541.191