Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01199 ATGCAGCAAGATCAGCAAAAAAAGGATCTGAAAGATTGGAAATTTTTCACCGAATATGGGGAGGGAAACAGATATAAAATTCTTGAAGTTATAGGGAAGGGAAGTTATGGAGTTGTTTGTGCTGCTATTGACACACACACAGGTGAGAAAGTGGCAATAAAGAAGATACACGATGTTTTTGAGCATATTTCTGATGCTCTTCGAATACTGCGGGAAGTAAAGTTGCTTCGACTTCTGAGGCATCCAGATATAGTTGACATTAAGAGAATAATGTTGCCACCTTCAAAAAGGGAGTTCAGAGATATCTTTGTTGTATTTGAGCTCATGGAATCTGATCTTCATCAAGTTATCAAAGCCAATGATGACTTGACCCGTGAACATCATCAGTTTTTCCTTTATCAAATGCTTCGTGCATTGAAATATATGCATACAGCCAACGTGTATCACAGGGACCTTAAGCCCAAGAACATATTGGCAAATGCTAACTGTAAACTTAAAGTTTGTGACTTTGGGCTAGCTAGAGTTGCATTTAGTGATGCTCCAACAACAATGTTTTGGACGGATTATGTCGCCACTAGATGGTATCGGGCACCAGAGCTATGTGGATCATTCTTTTCCAAGTACACACCTGCAATCGATATATGGGGTATTGGATGCATCTTTGCTGAGGTGCTGACAGGGAAGCCACTTTTTCCTGGTAAAAGTGTGGTACATCAATTAGATTTGATCACTGATCTACTTGGGACACCTTCTCCAGAAACTATTTCAGGAGTCCGAAATGAGAAGGCTAGGAAATACTTGATGGAAATGCGAAAAAAACCCGCTTTGTCTTTTGAGAAGAAGTTCCCAAAAGCTGATCCTATGGCACTTCGATTGTTGCAAAGGCTTTTAGCATTTGATCCGAAGGATAGGCCTACAGCCAAAGAGGCATTGGCGGAACCTTACTTCAAAGGCTTGGCTAAAGTTGAAAGAGAGCCTTCTTGCCAACCCATTTCGAAATTAGAATTTGAGTTTGAGAGGAGACGGGTGACAAAGGATGATATTAGGGAACTTATATACAGGGAAATACTAGAATACCATCCTCAGTTGCTCAAGGACTATATGAATGGAAATGAAGGCTCAAATTTCCTCTATCCAAGTGCAATTGGTCAATTTAGAAGGCAGTTTGCTTACCTTGAGGAAAATAATGCTGAAAGTGGCCCAGTGATTCCTCCAGAGCGAAAACATATCTCCCTCCCTCGGTCTACTGTTCACTCCAGTACAATTCCTCCAGTTGCATCTTTGAGTTTTGTTTCATATGAAAATAAACCAAGTGGTATGGCATCTAGGAATTACGGAGTGGCAGGTCCAAACTATGGAAATCATCCAAGGGTTTCGCTTCCTCCTCAATCAAGAGTTCCATCTGCCAAACCTGGGAGAGTAATTGGACCAGTACTCCCTTATGATAATAACAACATAAACTTGAGGAACGACTATGATCAGAAGTTGTGTTACCGAAATGGTGGATTGCCTCAGGCTGGTTCGCCCCACTGTTTCTTCCGGACTCAGAGTACCATAGATGAATCTTCACAGGCGAATGTGCAGTGTTGCAGCCAGCAATATAACTTGGCAGCCAGACAAGCTATTGATATTAACGCTAACCCATACCACCACCAACCGCAGATAGACTCGGTGAATAATGGAAATTGTATTGATGCAAAACTTCGACAGGCTCAAACTCAGTTTGGTGCAATAGGTGCTGCAGCAGTTGCCGTCGCTGCACACAGGAACACCGGGGCTGTTCTGTAG 1788 0.4228 MQQDQQKKDLKDWKFFTEYGEGNRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDALRILREVKLLRLLRHPDIVDIKRIMLPPSKREFRDIFVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDAPTTMFWTDYVATRWYRAPELCGSFFSKYTPAIDIWGIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETISGVRNEKARKYLMEMRKKPALSFEKKFPKADPMALRLLQRLLAFDPKDRPTAKEALAEPYFKGLAKVEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHPQLLKDYMNGNEGSNFLYPSAIGQFRRQFAYLEENNAESGPVIPPERKHISLPRSTVHSSTIPPVASLSFVSYENKPSGMASRNYGVAGPNYGNHPRVSLPPQSRVPSAKPGRVIGPVLPYDNNNINLRNDYDQKLCYRNGGLPQAGSPHCFFRTQSTIDESSQANVQCCSQQYNLAARQAIDINANPYHHQPQIDSVNNGNCIDAKLRQAQTQFGAIGAAAVAVAAHRNTGAVL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01199 595 FunFam Mitogen-activated protein kinase 111 339 - -
Pte1g01199 595 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte1g01199 595 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01199 595 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 360 - -
Pte1g01199 595 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pte1g01199 595 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01199 595 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pte1g01199 595 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Pte1g01199 595 FunFam Mitogen-activated protein kinase 14 119 - -
Pte1g01199 595 CDD STKc_TDY_MAPK 24 361 - -
Pte1g01199 595 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pte1g01199 595 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01199 Pte-Chr1 33007705 33011970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01199 1 594 MAP Kinase Gene Family AT1G53510 68.960 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte1g01199 Pkinase 6.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01199 - - gmx:100800878 909.827