Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01193 ATGAGTAGTGAAAAGGGCATAAACAGTGGTTTCTCATATGAACACCACAGTCATCACGGTCATCACCACCTTCATCAGGAAGAGACGCATCAGGATCCACCACTAGTTCAGTATGGTACGTTCCAAGGAGTCCCCAGCTACCCTCCACCTCGTCCTCCTCAATCACATCCACATCCAGCTATGGGCTTCCCTCACCCTGTTCCTCCTCCAGGGGCCATCAATTCATCTAATCCTTCTCAATACTACGCTCACGGGTACCAAACTGTTCCAGGATATGCAATAGCGGGAAGACCTGTAAGGGAGCATCGTCTCCCTTGTTGCGGTATGGGCCTCGGGTGGTTCTTGTTTATTATAGGTTTCTTCCTTGGTGCCATTCCATGGTATGTAGGAGCAATAATTCTTGCATGCGGTAGGTTTGACCATCGAGAGAAGCCTGGATATGTCACTTGCACTATTGCTGCCATTCTTGCAACAATAGCTGTAATATTCGGAGCGACAAAGGCTTCTGATGTTTGGTAA 519 0.4817 MSSEKGINSGFSYEHHSHHGHHHLHQEETHQDPPLVQYGTFQGVPSYPPPRPPQSHPHPAMGFPHPVPPPGAINSSNPSQYYAHGYQTVPGYAIAGRPVREHRLPCCGMGLGWFLFIIGFFLGAIPWYVGAIILACGRFDHREKPGYVTCTIAAILATIAVIFGATKASDVW* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01193 172 MobiDBLite consensus disorder prediction 1 30 - -
Pte1g01193 172 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 19 172 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01193 Pte-Chr1 32958992 32966682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01193 38 173 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 35.676 1.08e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01193 - - zju:107432747 190.274