Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01174 ATGGGGAGGAAAGAGAAGATAGTGCTTCCACCAGAACTACCACCGGATATTCCAGAAGATGATATTGATGTCTCTGACGAGGACTTACAGTTTGTCAATGAGAACCTTGATTATGCTGGATTCGTCTCAAGCTTAGACACGAAATCTATCACCAAGCATGTTTCACGAGTAGCTGACGCAAAGGAAGATGATTTGGAGGCTCTGTATGAGAAGAGGTTGAGAAAGAAGTCTCAGCAGACAAAAATTGAAGAGAGTGGGGTTCTAGTTGATCCTGTAGATGCTCTTCCTGTAAAGACATTAGATGGGCAGGTCCATTTCCGGACGGTATCAAAGGCATTAGCGACATCTGACGAGGGAACTGGTGGTAATGATAAGGAATGTGGTATAGTGAAGCTAACCAAGGCGGAGAGGAGGGCTAAACTTAAGAAACAAAAGAAAGAGGCGAAGAAACAAGAAAAGGATGTGGTAGAAACTGAACAGGAACCAACGCCTCAAGCTGCAATTCTGGCTGAAGTGAAAGAAGACCTTACACTGGAGGAAGCATTTGAAAATAAGAAGCATAAACTTGCAGATTTGGGAACTACTCTCCTTGCCAATCCAGAGTCTAACATTAAATCACTGAAAGAGATGATACAAATATCTAAAGATAGTGATCTTGCAATTTCCAAACTTGGACTGCTATCATTATTGGCTGTTTTTAAGGACATTATTCCTGGCTACCGAATCAGGCTTCCTACTGAAAAAGAACTAGAGATGAAGGTCTCAAAGGAAGTCAAAAAGATGCGATACTATGAATCCACTCTTCTTTCTGCCTACAAGGTGTATCTTCAGAAGTTGGTTACATTGGAAAAGCAGACTTTGTTTCAATCTCTTGCGATTCGCTGTATTTGTACTTTACTTGATGCACACCCCCACTTCAATTTTCGAGAAAGCCTACTTGGTGTTGTTGTCAGAAACATAAGTTCAAAGAACGATGCCATAAGGAAGCTCTGTTGTTCTACAATTAAGTCACTTTTTACTAATGAGGGTAAACATGGTGGTGTGGTTACTGAGGAGGCCGTTCGACTAATTGCAGATCATGTGAAAGCTCATAATTGCCAATTGCATCCTGACACTGTTGAGGTGTTCTTGTCGTTAAAATTTGATGATGATCTTGGGAAGTATGAAGAAGCAAAGAAGGATAACAGAGTTAAAAGGAAAAGAGGTAGGAAGAGGAAAAACTCAGAGGAACCAAATCGATTGCCGGGGAATGACAGAAAGAAAACTAGGCAAGAAACCATAGCAAAGATGAGAGAAGAGGTTACAACTGAATATAAGGCTGCATCTTTTACCCCTGATGATATGGAGCGGAAAAACATTCAATCTGAGACACTGTCTGCTGTATTTGAGACATATTTTCGCATATTGAAGAATGCCATGGAGCCAATAGATGCCAGCGCTGAAGGCAATGCAGGCTTATCATCTGCTACATCCAGCTGCCATCCACTACTTGCTCCATGTCTGAAAGGGCTGGGAAAATTCTCACATCTTATTGATCTTGACTTCATGGGTGACCTCATGAATCATCTGAAAATGCTTGCGTCTGCAGGAAAATCTATTGAGAGTTCTGAGAAATCTTCCAAATGTCTGAATGTATCTGAGCGCCTGCAGTGCTGCATCATTGCTTTCAAAATAATGAGAAGCAACCTTGACGCATTGAATGTTGATTTGCATGACTTCTTTGTTCAACTTTTCAATCTTATACACGAATACAGACCTGGAAGAGATCACGGCCAGGTTTTGGCTGAAGCTTTAAAGGTTATGCTATGTGATGAAAGGCACAGTGACATGCAAAAGGCTGCTGCATTTATAAAACGTTTGGCTACATCCACATTAAGCTTTGGATCAGCTGAGTGCATGGCAGCCTTGGTTACTGTAAAACATCTTCTTCAGAAGAATGTGAAGTGCAGAAATCTTCTCGAGAATGATAGTGGGGGAGGCTCTGTATCAGGTTCTATTGCGAAATATCAACCATATGCTACAGACCCCAATTTAAGTGGTGCACTTGCTTCAGTCCTTTGGGAATTAAGTCTTCTGTCCAAGCATTATCATCCAGCCATATCAACTCTGGCTTCAAGTCTTGCAGGCATGAATGCGGCGCAAAACCAGGTCTATCTCACCACTCAATCTCCACAACAAGCTTTTCTGGACTTCTCGATAGACCGAGAAACGTTTCAACCCCCAAGTGATACAATGAAGCCAAGTAAGAGGAAAAGACTAACCGATTCCTCCATAACGACTCATGTTAAACCTGCCACACTCTTAGAGCCACTTGATGAAGATCACATGAAGACAAGACTTCGTGCTCACTTCACATTCATGCAAGGACTTCAGGAACAAGAGAGGCTGAGAGATGAGTTGGACAAGACAAAATCATTCATACAGCTGTATGAACAGTATAAGCAGCCAAAGAGAAAGCCAGCTGCGAAATCAAAAAAGAAGTTAAAAAGCAGTAATGCTTAA 2502 0.4165 MGRKEKIVLPPELPPDIPEDDIDVSDEDLQFVNENLDYAGFVSSLDTKSITKHVSRVADAKEDDLEALYEKRLRKKSQQTKIEESGVLVDPVDALPVKTLDGQVHFRTVSKALATSDEGTGGNDKECGIVKLTKAERRAKLKKQKKEAKKQEKDVVETEQEPTPQAAILAEVKEDLTLEEAFENKKHKLADLGTTLLANPESNIKSLKEMIQISKDSDLAISKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRYYESTLLSAYKVYLQKLVTLEKQTLFQSLAIRCICTLLDAHPHFNFRESLLGVVVRNISSKNDAIRKLCCSTIKSLFTNEGKHGGVVTEEAVRLIADHVKAHNCQLHPDTVEVFLSLKFDDDLGKYEEAKKDNRVKRKRGRKRKNSEEPNRLPGNDRKKTRQETIAKMREEVTTEYKAASFTPDDMERKNIQSETLSAVFETYFRILKNAMEPIDASAEGNAGLSSATSSCHPLLAPCLKGLGKFSHLIDLDFMGDLMNHLKMLASAGKSIESSEKSSKCLNVSERLQCCIIAFKIMRSNLDALNVDLHDFFVQLFNLIHEYRPGRDHGQVLAEALKVMLCDERHSDMQKAAAFIKRLATSTLSFGSAECMAALVTVKHLLQKNVKCRNLLENDSGGGSVSGSIAKYQPYATDPNLSGALASVLWELSLLSKHYHPAISTLASSLAGMNAAQNQVYLTTQSPQQAFLDFSIDRETFQPPSDTMKPSKRKRLTDSSITTHVKPATLLEPLDEDHMKTRLRAHFTFMQGLQEQERLRDELDKTKSFIQLYEQYKQPKRKPAAKSKKKLKSSNA* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01174 833 MobiDBLite consensus disorder prediction 1 21 - -
Pte1g01174 833 PIRSF Noc3 2 828 IPR016903 -
Pte1g01174 833 MobiDBLite consensus disorder prediction 142 162 - -
Pte1g01174 833 Coils Coil 131 161 - -
Pte1g01174 833 MobiDBLite consensus disorder prediction 392 425 - -
Pte1g01174 833 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 5 811 IPR016903 -
Pte1g01174 833 MobiDBLite consensus disorder prediction 819 833 - -
Pte1g01174 833 MobiDBLite consensus disorder prediction 407 425 - -
Pte1g01174 833 Pfam Nucleolar complex-associated protein 185 275 IPR011501 -
Pte1g01174 833 SUPERFAMILY ARM repeat 209 604 IPR016024 -
Pte1g01174 833 MobiDBLite consensus disorder prediction 811 833 - -
Pte1g01174 833 Pfam CBF/Mak21 family 549 704 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01174 3 800 Core DNA Replication Machinery Family AT1G79150 58.168 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01174 K14834 - qsa:O6P43_029352 1041.57