Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01173 ATGAAGAAATTGATTAGCAGGCTTTCGCGAGTCGCCGACTCGTCTCAGTACACTCTCCTCCGATCCGATTCGCAGACTAGGAGACCACGACGTGTGGAGTCGTTTAGAGCCGTGGCGGCGAAAATCCGGCGGTCTCGACCATTAAAATCCACTACGGGAGTGCCTCAGGGTCACGTGCCGGTCTATGTTGGCGACGAGATGGAACGGTTCGTGGTGAGTGCTGAGTTGCTGAACCATCCGGTATTTGTGAAGCTCTTGAACAAGTCGGCGCAGGAATACGGATACGAACAGAAAGGTGTGCTCCGGATTCCGTGTCACGTGGTCGTCTTTGAACGTGTTCTTGAAGCGTTTCGTCTTGGTCACCATGAGTCAAGTGACCTTCAAGACTTGCTTCATTCTATGTCCGATGAGTTTTTCTGA 420 0.519 MKKLISRLSRVADSSQYTLLRSDSQTRRPRRVESFRAVAAKIRRSRPLKSTTGVPQGHVPVYVGDEMERFVVSAELLNHPVFVKLLNKSAQEYGYEQKGVLRIPCHVVVFERVLEAFRLGHHESSDLQDLLHSMSDEFF* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01173 139 Pfam Auxin responsive protein 31 116 IPR003676 GO:0009733
Pte1g01173 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01173 Pte-Chr1 32236040 32237564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01173 42 115 Calmodulin-binding Proteins AT4G31320 41.892 6.00e-18 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01173 1 32236040 32237564 Pte1g01173 1 32236040 32237564 RCT