Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01168 ATGAGGTCCCGTAAGCAAAAGGCCGACAGCAATCGGAGTATCACGGGTCACATTCATACCCTCCATCAACGTCTTTACCATTCACTCGGACTTGGAACTAGATTTTTTGATGAGAATTCGAGGAAAATGAAATGGAAGTGTTCAGATATTGAGGTCCAGAAACTTGTGCTTCGTTCCATGGCTGCGTTTCTTGATTCATTGTCCGGAGATTTGATCCATGTTCCTCTTGTGAAGGATGCTATTGCTGACCTTATTGGAGCATTGTCATGGATTCTTGAATGCAAAACTCCAACTACTATTCCGATTGCAGCAAACATTGCAACAAAAATAACGGGTTTTTTGCCAAGTCATGTGGTGCAATCTTGTGTGTTGGATCTTGTTTGCCCATTGTCATCGTTGCTCTCCTTTCAACAAGTAGAAGTCAAGATATTATGTGCCAATGCTCTAAAAAGGATAGTCAGAAACTTAAATGCTAGAAGCGAGAAAATGGTTTGGGTGGAATTGAAAGAAATGAACTGTGTTTCTCATATAGTTAGCAACTTAAGAGATCATCAAGGAGGCACGATGAAGACTGAATATTTCCAAGAGCTTGTTTCACTTTTGTCCATCATACTGTGGCATTGGCCATCATCTAGATTTGCGATTTGGACTGATGAAAAGTTGATGAGATTTCTAGCTAATAAATATACGGAGACTGAGACAGAATCTTCTATTAAGGTTTCAGTTTTGAACTTATACTCATCTTTAGCTTTATGTGGTATTGGAGCAAGAAAGCTTATAGAAAGTGGAGAAGGATTTCTGCAGATGATTGTGCAATGCATGGGAGAACGGTATCCTCATGTTCTCCGAGTAGAGGGATTCAAACTCATGCAATTTTTAATGAGAAATGAAGATTGTTGTTCTAGAGTGGTGACTTCATGTGGTGAACCTCTTGTCCAAGCTATCATTTGTGCAATGAGGGAAACGGAGTCACATTCTAAGAAGATAGGCAACAATCATAGTTCTTTGTTGATGGAAGCCTGCCGCTTGGCTCGGATAACTCGTTGGATTGGCAAACATCATTATACTTTTTGGAAGGACGGACTTGGTGTCCTGCTTAACCTTCTTGTAGAAGACTTTTCAAGTCAACCATTTGAAATTGACCTTTCACTGGAAGAGAAAATAAGTGTAGCATGTCAAGGATTGAGTGCGAGATATCTTCTCGATGTGAGAGGTTATGTGTGGGATGTTCTTGGATGGCTTGCAATACACTGTGAAGAAGACTTTGTCCCTGATACACAAGAAAACAAATTCCAACTTAGCATGCTTATTATATGTGCATGCTTGGCCTTTATGGAAAAAATTCATAAGTGGTCTCTGATATATCAAGATTATGTTGATGATGACATGGAAAGTGAACCGGTATCAAGGGCTGTTCTAATGATGCTTTATTCTCCATGCAAGTATATCACGTCAAAGGCTAGATTAATCTTCTCCAATATTTTAAAATCAGCTTGCAAGTTGGACATGAAGTGCATAATTCATACATTGAGTTATGCATCATCCTTTGAAAGCTTTGGATTGGAGAACAAGATTCAAGTTGTGATAAATTTGGTTGTTTTCATATGTTGCTTAAGTTTGCCTCAGTATCGCACTTGCCCTACAAAAGACAAAGCTGTGAAGGCACTGGTTGCTCTTCTGAAGCGTTGTTTGATCAATGACATAAATATTGAAAGATCAAGTATTGCACCACATCTGTGTATCATGTCCAATGAGCGGGTGTGTTGCTGGGTAGCTACAACTGATTGGGAAGGAACCAATATTCTCTTGTTCTACAGTTTGTGGGGTCTTGCTGAACTTATACACTACTCTGAGACTCTGAGAGGTGATCTCAGCTTACTCTCTACTCAAATGGATTGTACTGAAGTCCAATTTATTGCCAAACTTAAGGAGATCTGTCAGAAAGATTATGCTCCAGGTGTTAGGTGGTATGCTGCTTATGTCCTTAGTTTCTTTCGTTTCTATGGTTTCCCTAGTGCCTTTGGAAAACGAATTGGGAAATTGCTTACAGGGGACATCTTTCAAGATGTTAATATGATATTCGTAAATGGTAAGGTCTTAAGAGCTCAAGGTGTTATTCTTGCAATACGCTGTCCATTGTTATTGCCTTTGAAAGGATTCTCAATGGAGGATGAAGGCACCAGTGATTTGCCAAAAGAAGTATCAGACAATGGGTTCAACAGAGAGGTCTGCTCAGTACACTTATCTGCACAAGTTGATTATGAAGCTATGATGAAGTTGTTGGAATATGTCTACTTTGGCTATGTAGAAGTAGAGGAGGAGCTTATAAGTAAGCTGAAAACTCTTGCTAAGCACTGTGGACTAAAACCTCTGTTTCAACTGCTTTGCCATAAGCATCCTAAGTGGGGTTCTTCCTTCCCTCTCCCTGATCTGACATCAGCAACTGGTCCAGTTGGATATTATTTCAGGGACGTCATGTTGGAGTCGGAAACAGAAAAAGTTGCAGGGTGGAGTTGCACTACATGTTCTCATTCGGTGCCCCACATGCATTCCCACAAAATTATTTTGCAGTCGTCATGTGGTTATTTGCAGGCTATATTTCAGTCAGGAATGCAGGAGAGTTATTCTGAAAAAATAAGGGTTCCAATAAGTTGGGAAGCAATGGTTAAATTAGTGCACTGGATACATTCAAACAAATTGCCGAATCCCCCCTCTGATTGCTTATGGGTTAATCTGGATAAAGAAGAAAAACTTTTCACACTGAAATCATATATTGAGCTCCTTTGGCTTGCTGACTTCTGGCTCTTGGAAGACATTGGGGAAGCTTGCTGGACTGTGGTCACATCTTGTCTTGATTCTGCCAGGGAGCTGGCTTTTACGATAATCCAAATTGCTGCTAACTTCTCTATTTGGAAGTTAGTTGAAGTTGCTGTCAATTATGTGGCCCCATCATTTCGGCAACTACGTGATTCTGGTGAACTTGATTCTTTGGATGAAGAACTCGCTAACCTTATTCGTTCTCGTTTTCTTCAGCTCACCCAAGAAGGTACCAATAATTTATCCATACACAAGTTCCTTAAGTCGGAGCCTTTCAGTTTGACTGATTTTCAATTTTCTAGTCACTTCTATGTCATATATTCTTGGGATTCATATCCTTGTTTGTTTGATCTTATTGCTTATGTGAAATGCAGTTATAAACCAGCTCTTTCACTTGAAGTTATATCAACAAAATGA 3234 0.397 MRSRKQKADSNRSITGHIHTLHQRLYHSLGLGTRFFDENSRKMKWKCSDIEVQKLVLRSMAAFLDSLSGDLIHVPLVKDAIADLIGALSWILECKTPTTIPIAANIATKITGFLPSHVVQSCVLDLVCPLSSLLSFQQVEVKILCANALKRIVRNLNARSEKMVWVELKEMNCVSHIVSNLRDHQGGTMKTEYFQELVSLLSIILWHWPSSRFAIWTDEKLMRFLANKYTETETESSIKVSVLNLYSSLALCGIGARKLIESGEGFLQMIVQCMGERYPHVLRVEGFKLMQFLMRNEDCCSRVVTSCGEPLVQAIICAMRETESHSKKIGNNHSSLLMEACRLARITRWIGKHHYTFWKDGLGVLLNLLVEDFSSQPFEIDLSLEEKISVACQGLSARYLLDVRGYVWDVLGWLAIHCEEDFVPDTQENKFQLSMLIICACLAFMEKIHKWSLIYQDYVDDDMESEPVSRAVLMMLYSPCKYITSKARLIFSNILKSACKLDMKCIIHTLSYASSFESFGLENKIQVVINLVVFICCLSLPQYRTCPTKDKAVKALVALLKRCLINDINIERSSIAPHLCIMSNERVCCWVATTDWEGTNILLFYSLWGLAELIHYSETLRGDLSLLSTQMDCTEVQFIAKLKEICQKDYAPGVRWYAAYVLSFFRFYGFPSAFGKRIGKLLTGDIFQDVNMIFVNGKVLRAQGVILAIRCPLLLPLKGFSMEDEGTSDLPKEVSDNGFNREVCSVHLSAQVDYEAMMKLLEYVYFGYVEVEEELISKLKTLAKHCGLKPLFQLLCHKHPKWGSSFPLPDLTSATGPVGYYFRDVMLESETEKVAGWSCTTCSHSVPHMHSHKIILQSSCGYLQAIFQSGMQESYSEKIRVPISWEAMVKLVHWIHSNKLPNPPSDCLWVNLDKEEKLFTLKSYIELLWLADFWLLEDIGEACWTVVTSCLDSARELAFTIIQIAANFSIWKLVEVAVNYVAPSFRQLRDSGELDSLDEELANLIRSRFLQLTQEGTNNLSIHKFLKSEPFSLTDFQFSSHFYVIYSWDSYPCLFDLIAYVKCSYKPALSLEVISTK* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01168 1077 Pfam BTB/POZ domain 848 940 IPR000210 GO:0005515
Pte1g01168 1077 Gene3D Potassium Channel Kv1.1; Chain A 670 799 IPR011333 -
Pte1g01168 1077 ProSiteProfiles BTB domain profile. 688 773 IPR000210 GO:0005515
Pte1g01168 1077 PANTHER OS06G0674800 PROTEIN 1 1016 IPR044953 -
Pte1g01168 1077 CDD BTB_POZ_ZBTB_KLHL-like 850 934 - -
Pte1g01168 1077 SMART BTB_4 688 804 IPR000210 GO:0005515
Pte1g01168 1077 SMART BTB_4 838 951 IPR000210 GO:0005515
Pte1g01168 1077 SUPERFAMILY POZ domain 849 946 IPR011333 -
Pte1g01168 1077 Gene3D Potassium Channel Kv1.1; Chain A 821 991 IPR011333 -
Pte1g01168 1077 ProSiteProfiles BTB domain profile. 823 904 IPR000210 GO:0005515
Pte1g01168 1077 SUPERFAMILY POZ domain 665 796 IPR011333 -
Pte1g01168 1077 SUPERFAMILY ARM repeat 48 495 IPR016024 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte1g01168 BTB 9.5e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01168 - - qsa:O6P43_029321 1076.23