Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01163 ATGCCTTCTATGTCTTCCGCTGTTCCTCAACTTTACCCAAACAACACATTACTTGCAGACCATTTCTTTGCGTTTTCAAATCCGACAATTGCTGCTGGCACAGGTGGTGGCTCTCTTATAGAGGGCTCAATTTTATGGGATGGAGATAATAAGCTTGTCCCATTGTTTGATCACAATGGTGCACTTGATTATGTGGTTTCACCAGATTCCAATAGGGACATGATATCTTCTGCTTCCATGTCTTCCTTATCTGAGCCATTAGGGAGTGCATCTGATTTGGATATGCTAGCATTCTCAGATTACAGTACAGACCTTCATCATGGCATTTCATGTGACCAGAATTTTGGTGTTGGGTATCAACCAGCTGTAAGTCAGTTAAGAGTGAACTGCTGCAACTTAGTTGAGGACTTCGACAGGCAGGCTTATCCCATTGCAGCCCAAGAAACCTGGGGAATTCAATGTAATCATGAAATGAAAACAGTGGAGGAACCTCAGGTAAAAGTAGGCAGGTACTCAGAAGAAGAAAGGAGGGAGAGAATACACCGATATTTGAAGAAGAGAACCCAAAGAAATTTCAACAAAACCATCAAGTATGCATGCCGGAAAACCCTAGCTGACAGGAGAGTGAGAGTCAGGGGGAGGTTTGCAAAGAACAGCGATTCGTGTGATCAAGAAGAATTTTCACTGAAGAAGGATGGCATTAATCCTCACAAAGAAGATTTTTACCTTGCTGATGCGAAGTTACAGAATGATGATGAAGATGAGTGGCTGCAAGCGACCATGGCAAATCTAGTGCATCTATTTCATTCTTTCCCGGATGGTACATTCATATGA 834 0.4257 MPSMSSAVPQLYPNNTLLADHFFAFSNPTIAAGTGGGSLIEGSILWDGDNKLVPLFDHNGALDYVVSPDSNRDMISSASMSSLSEPLGSASDLDMLAFSDYSTDLHHGISCDQNFGVGYQPAVSQLRVNCCNLVEDFDRQAYPIAAQETWGIQCNHEMKTVEEPQVKVGRYSEEERRERIHRYLKKRTQRNFNKTIKYACRKTLADRRVRVRGRFAKNSDSCDQEEFSLKKDGINPHKEDFYLADAKLQNDDEDEWLQATMANLVHLFHSFPDGTFI* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01163 277 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 76 230 IPR045281 GO:0009909
Pte1g01163 277 Pfam CCT motif 176 218 IPR010402 GO:0005515
Pte1g01163 277 ProSiteProfiles CCT domain profile. 176 218 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01163 Pte-Chr1 31972330 31974204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01163 172 221 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 4.21e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g01163 CCT 6.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01163 - - gmx:102660475 238.039