Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01145 ATGGAACACATGTACCATTGGCTATCCCTAGACATCAATGATGAGAACCTGATCCATGACTTTGCTATTAGAAGATTTTGCCCAGCAAGAATAGAGCAAGAGCAAGTAGTCGACTGGGAGGAGGTAGCAGTTGATGACACCGAAGCATGCTCTCCTTGTGAAGTCACTGTTTGTACTCCTTGCTTATCTTCTTCTGAGGTTGATGAATTTGTGGATAGCTTGATAAATATGGATCAATGTGACATCAATGAGGTAAAAGATCCCCAAGAGAAGCAACAAATGATTGAACATTTTCAAGATGGCATTGAAGCACATTCGTTGATGGATGCCTTTGAAGATGTTCCAATGATGATAGAGGAAGAGGAATATGGAGGAAATGAATGTTTCAGGAGTGCTCCAGGATCGGTTGTGAACCTGAATGGCCAAGGTATGAATCAAGGATTGCATTTGGTGCACATGCTACTGGCTTGTGCCGAGGCAGTAGGATGCCGTGACATCCAACTGACAGAGTCAATCCTCAGCAAAATATGGGCGCTTTCTAGTCCTTGGGGTGACTCATTGCAGAGAGTCTCATACTGCTTTGCCAGAGGATTGAGTAGCAGGCTTTCAAAGCTTCATCATGTTGCCAATGTAACACCAATTGGTGACATTGATGCCTCTGTGGTCACCAAGGAGGAAACCTTGGAAGCTTTTCAACTTCTTTACCAAACAACTCCTTATATTTCCTTTGGATTTATGGCTGCAAATGAGGTCATATGCCAAGCTGCTCAAGGGAAGAGCTCTTTGCACATTATTGATCTAGGAATGGAACATGGCCTTCAATGGCCTTCTCTGATAAGATCACTTGCATCGAGAGCCGAGGGTCCTCCAATGCTCAAAATCACTGGATTAACCACTAATGACGATGTATTAGAACTTGAAGCCAGCATGAGAGCACTTGTGGAGGAGGCCAAATCTCTAGGCATCATGATGGAATTCAATATAGTGTCAGAGGCAGTAAGTCCATATCTTCTAACTAAAGAGAAGCTGAACATAAGAGAGGGTGAAACATTATTTGTTAATAGCATCATGCAATTGCATAAGTATGTGAAAGAGAGCAGAGGATCTCTCAAGGCAATCCTCCAAGCCTTCAAGAAGTTAGGCCCTACTGCTCTTACAGTTGTAGAGCAAGATGCAAACCACAATGGGCCTTTCTTCCTTGGGCGATTCCTTGAGTCTTTGCATTACTACTCTGCCCTTTTTGACTCTCTTGAAGCTAGTCTTCCAAGGAATAGTCCCCAGAGAATGAAGATTGAGAGACTGCGATTTGCAGAAGAAATTTGCAACATTGTGGCTAATGAGGGCCCTGAAAGGATTGAGAGACATGAAAGGGTAGATCAATGGAGAAGGCAGTTAGGCCGAGCTGGCTTTCAAGTGATAGCACTGAAATGCATGAGTCAAGCAAGGATGATGCTTTCTGTTTATGGTTGTGATGGATACACATTGGCAAATGAGAAGGGTTGCCTCCTGCTTGGGTGGAAAGGCAGGACTATAATGATGGCTTCAGCATGGAAATGCACAATGTAG 1566 0.4368 MEHMYHWLSLDINDENLIHDFAIRRFCPARIEQEQVVDWEEVAVDDTEACSPCEVTVCTPCLSSSEVDEFVDSLINMDQCDINEVKDPQEKQQMIEHFQDGIEAHSLMDAFEDVPMMIEEEEYGGNECFRSAPGSVVNLNGQGMNQGLHLVHMLLACAEAVGCRDIQLTESILSKIWALSSPWGDSLQRVSYCFARGLSSRLSKLHHVANVTPIGDIDASVVTKEETLEAFQLLYQTTPYISFGFMAANEVICQAAQGKSSLHIIDLGMEHGLQWPSLIRSLASRAEGPPMLKITGLTTNDDVLELEASMRALVEEAKSLGIMMEFNIVSEAVSPYLLTKEKLNIREGETLFVNSIMQLHKYVKESRGSLKAILQAFKKLGPTALTVVEQDANHNGPFFLGRFLESLHYYSALFDSLEASLPRNSPQRMKIERLRFAEEICNIVANEGPERIERHERVDQWRRQLGRAGFQVIALKCMSQARMMLSVYGCDGYTLANEKGCLLLGWKGRTIMMASAWKCTM* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01145 521 ProSiteProfiles GRAS family profile. 141 518 IPR005202 -
Pte1g01145 521 Pfam GRAS domain family 150 518 IPR005202 -
Pte1g01145 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 517 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01145 Pte-Chr1 31318913 31320551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01145 131 520 GRAS Transcription Factor Family AT1G66350 38.384 5.00e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g01145 GRAS 9.6e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01145 - - qsa:O6P43_029374 681.019