Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01137 ATGAGCGGAAGGTCAGCCATGACCAAACAGTTGCACTATATAAATAAATACCACATAATTCAACCAAGAAGTTCTCACATCCTACGGAAACTCGCATTAGTAGATTCATTGCGCAAGGTGGCTGGGAATTTAGAAAATAATCAGATCATATTGAGAGCCACTGCTATTGAAGATAGACGACAACAAGAGGTGCCTGAATCAATTGAGTCCCTCAGAACTACAGGAATTAAGGTGTGGGTATTGACTGGGAACAAACAAGAAACTGCTATAGCAATTGGGCATTCTCCAAAGCTCTTGACAAGAAAAATGACAAATATAATAGTTAACGGAAACATCAGGGAATCATGTAGAAGGAGTATAAGAGATGCTCTAGTCATGACAAGAAAACTCAAGTCTGTCCTGTGGTTCCAATTGATAGTGAAGTGGCGGGTCAATGGATTCAGTAAGACTCCGGTGGCCTTGATCATTAACTGTACCAGTCTTGTTTACCTTCTTGACAGAATGTCTCTTGAGGAGGGATTAGAGTATGCCCTTCATAAGCGGAGGAAGATGGCACGTTCTGGTAGAGCCGTTGAAGAGATTGAACTAAATAATCTGACAGATAGATTGCCTAATCCTAAACGAGAACATTGTGAAGTGGAGATTTTGAGCCCTTTTGGAGAAAAGGGTCTTGCCACACACTTAAACAATGGTCTTACGGATGTGTCTTGTTGCACCAAGGAAACTGGAGCACTTGGTGGTCAAATTGGAAAGTTAAAATCTGCGCCTCAAATGGCAATGCAATCTTGGGCTAAGTCTTTTGGGAAGATTCCGTGGATTACTTTGGAGCAACAGTTGAGGGTACTGACAGAAGGTGTCACTGCTTTATGTTCTGGAATGGCTGGAAGATTGTTGGGACTCCTGTATCATAACATTAGATGTTGGCCAGGCGGATTGGGGAAGAGATCATATGTTGCTATTGGAGCATCTGGTGACGATAATGATTTATTGGGCAGGCCTGTAGAGAATTGTTTGTTTTCTGCTGGTGTAGCGACCTGCAAAGAGCATCCAGACACGGTGGCGGTTATTTTCTTTAATGCTGTGGACATTGGATCAAGGTGTTGGATGACTCATCATATTTGTGGTGATAACCATGTTCATCATTCAGACAATTATGGAGCAGTTACTTCAATTGATCAATCTAATGCAGAACAATTGATCTTAACTAGGAAAATGGGATTGCTGGAATCTTGTCCAGAAGATGAAGTTGAGGCGGAGATTTTTTACTTCCAGCACAGATTACTATTAATATTAACAGCAGTTATTAAACATGCAGAGGATTGTAAAGAACCGGAGAATCACTTGAAACTGTTTTTCTCAATTCAACCTTGA 1371 0.4114 MSGRSAMTKQLHYINKYHIIQPRSSHILRKLALVDSLRKVAGNLENNQIILRATAIEDRRQQEVPESIESLRTTGIKVWVLTGNKQETAIAIGHSPKLLTRKMTNIIVNGNIRESCRRSIRDALVMTRKLKSVLWFQLIVKWRVNGFSKTPVALIINCTSLVYLLDRMSLEEGLEYALHKRRKMARSGRAVEEIELNNLTDRLPNPKREHCEVEILSPFGEKGLATHLNNGLTDVSCCTKETGALGGQIGKLKSAPQMAMQSWAKSFGKIPWITLEQQLRVLTEGVTALCSGMAGRLLGLLYHNIRCWPGGLGKRSYVAIGASGDDNDLLGRPVENCLFSAGVATCKEHPDTVAVIFFNAVDIGSRCWMTHHICGDNHVHHSDNYGAVTSIDQSNAEQLILTRKMGLLESCPEDEVEAEIFYFQHRLLLILTAVIKHAEDCKEPENHLKLFFSIQP* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01137 456 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 175 - -
Pte1g01137 456 SUPERFAMILY HAD-like 45 139 IPR036412 -
Pte1g01137 456 Gene3D - 47 201 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01137 Pte-Chr1 30972371 30976464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01137 37 166 Primary Pumps ATPases AT5G04930 54.615 5.74e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01137 K14802 - cave:132190383 151.369