Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01129 ATGGTGGAACAGACGGAGAAGGCATTTTTGAAGCAGCCCAAGGTGTTTCTTAGCTCGAAGAAATCTGGAAAAGGTAAAAGGCCTGAAAAAGGAGGCAACAGGTACTGGAAATCCATCGGATTGGGTTTTAAAACACCTAGAGATGCCATTGAAGGAACTTATATTGATAAAAAATCCCGTTTACTGGAGCTATTTCCATCAGAGGTCGTATTCTTGCTGGTACTTGCCACAGTGCTAAGATGGTTCGGACAATTATTGTGTGCAGGAATTATCTCCACTATATCAAGAAATACCAAAATCTATGAGAAGAGGCATTCAAACATAGCGGCTCATATCTCTCCTTGTTTTCGTGTGAAGGAGGGTGACCATGTCATTTTTGGACAGTGCAAACCATTGTCAAAGACCGTGAGGTTTAATGTCAACAGAAAGCAACAGATAGTAATTTTTTGGACATCCAATGGTAAGGATCTTTCCAGGTCTCAACATATGCTAACACTATGA 501 0.4072 MVEQTEKAFLKQPKVFLSSKKSGKGKRPEKGGNRYWKSIGLGFKTPRDAIEGTYIDKKSRLLELFPSEVVFLLVLATVLRWFGQLLCAGIISTISRNTKIYEKRHSNIAAHISPCFRVKEGDHVIFGQCKPLSKTVRFNVNRKQQIVIFWTSNGKDLSRSQHMLTL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01129 166 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 101 141 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pte1g01129 166 SUPERFAMILY Nucleic acid-binding proteins 99 142 IPR012340 -
Pte1g01129 166 Gene3D - 1 64 - -
Pte1g01129 166 Gene3D - 89 148 - -
Pte1g01129 166 Pfam Ribosomal_S17 N-terminal 4 58 IPR032440 -
Pte1g01129 166 Pfam Ribosomal protein S17 99 141 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01129 Pte-Chr1 30647546 30648046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01129 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 61.429 7.33e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01129 K02949 - msin:131218809 181.03