Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01117 ATGCTTGCTTACAAAACAATTTCAGGAACGAAAAGCTTCAGAAAATCAGTTCATCTTACATTGCAATTCTTTGCTTTCTGTTCAAGTCTAATTGGTGTGTGGGCTGCATTGAAGTTTCACAATGATAAGGGGATTGACAACTTCTATAGCCTGCACTCATGGTTGGGCATACTTTGTCTCCTACTGTTCTCCATCCAGTGGGCTAGTGGGTTTGCAACCTTTTGGTATCCAGGAGGAACCAGAATTAGCAGAGCTTCCCTTTTACCATGGCATGTCTTCTTCGGGGTCTATATCTATGCTTTTGCTCTTGCCACAACAGTCACCGGGATTCTGGAAAAGGCTACATTCCTTCAAACTAACCAAATAATATCACGTTATTCCAATGAATCCATGCTTCTTAACTCTTTGGGTATGTTGATAGTGCTCCTGGGTGGTCTTGTTATCCTTGGAGTCCTTGCTCCATTAAATGGGAAAGCTGATATTCCTAGATGA 492 0.4187 MLAYKTISGTKSFRKSVHLTLQFFAFCSSLIGVWAALKFHNDKGIDNFYSLHSWLGILCLLLFSIQWASGFATFWYPGGTRISRASLLPWHVFFGVYIYAFALATTVTGILEKATFLQTNQIISRYSNESMLLNSLGMLIVLLGGLVILGVLAPLNGKADIPR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01117 163 PANTHER CYTOCHROME B561-RELATED 1 152 IPR043205 GO:0016491
Pte1g01117 163 Gene3D - 1 162 - -
Pte1g01117 163 ProSiteProfiles Cytochrome b561 domain profile. 1 152 IPR006593 -
Pte1g01117 163 SMART 561_7 1 110 IPR006593 -
Pte1g01117 163 FunFam Cytochrome b reductase 1 1 160 - -
Pte1g01117 163 Pfam Eukaryotic cytochrome b561 1 116 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01117 Pte-Chr1 30208888 30210173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01117 1 161 Chloroplast and Mitochondria Gene Families AT5G38630 68.323 4.74e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01117 K08360 - csin:114307971 258.07