Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01116 ATGTTCACCAACACCTTCAGTATTAACCCTTTTCCTCTTTTTCCCTCATCTTCATATCCACCATTGTATCTGAATCACGAGAAATCTGAAACTTTTCTGCATGATCCAATAGTTGTTCCCTTTATACCCGGTGATAACAATGTCTACTCAATCCCTCAGACGACAGTCAATTTTACTGCCAATCATTGTAAGCCGAATGAAGTCAACCGAGACCACTATGGTCTTTCCGGTCTTTTAGGCAGAAAGCCTGCCAAGAAAGACAGACACAGCAAGATTTGCACAGCTCAAGGTGTTAGAGACCGCAGGGTAAGATTGTCTATTGGAATTGCCCGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGCAGAACGCTGGAATGGCTGCTTAAAAACTCAAAGAAAGCGATTCAAGAACTTGCCCTGACAAAGCAAAGCTATGGTGAGGGTGCCAAAAGTTTGTCTTCCCCTTCTAAATGTGAAGTGGTTTCAGGGATCAATGATTGTGAAGATCCAGCTGAAAGGTTTCGTTCCAGCATCAAATCATTGCCGGTTGAGGTTAATGAAGACAAACTGTTGAAAAGGACACTGTCTGAGATAGCAAAGGAGTCAAGGGCAAAGGCGAGAGCAAGAGCAAGGGAAAGAACCCGAGACAAGATGAGTACCAGGTTCCACGACTCCTTCATTTCTAGAGTGCCGCAAGTGTTTCACCATTCTAGCTCTGCAGAAGCTAGCATTGAAAAGTCAACTAAGTCAGTCGCAGAAATTGAAGACTTACCAGGTGCTCAAGTGACAAAAGAGAAGGTTCTGGAGGATCCTATTGTCATCAAAAGGAAGTCAATGCAATCTTTGATCTCAAGCTATCCCCAGAACCCTACGATCTCAGAAGATGCAAGACGCAACAACTGCATATTCCCCAATTGCACTCCAAATTGGAATGTGAGTGGTGCCACTTCACATACTAGCCTTTGTGCAGTCACTAACATGAATCTCAATACAGAGCTTCAAATATTTGGGAAGCCATGGGAGGTCTATGAAGGTCAGCGTCTGCATTAA 1065 0.4357 MFTNTFSINPFPLFPSSSYPPLYLNHEKSETFLHDPIVVPFIPGDNNVYSIPQTTVNFTANHCKPNEVNRDHYGLSGLLGRKPAKKDRHSKICTAQGVRDRRVRLSIGIARKFFDLQDMLGFDKASRTLEWLLKNSKKAIQELALTKQSYGEGAKSLSSPSKCEVVSGINDCEDPAERFRSSIKSLPVEVNEDKLLKRTLSEIAKESRAKARARARERTRDKMSTRFHDSFISRVPQVFHHSSSAEASIEKSTKSVAEIEDLPGAQVTKEKVLEDPIVIKRKSMQSLISSYPQNPTISEDARRNNCIFPNCTPNWNVSGATSHTSLCAVTNMNLNTELQIFGKPWEVYEGQRLH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01116 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 80 281 IPR005333 GO:0003700
Pte1g01116 354 ProSiteProfiles R domain profile. 205 222 IPR017888 -
Pte1g01116 354 Pfam TCP family transcription factor 84 225 IPR017887 -
Pte1g01116 354 ProSiteProfiles TCP domain profile. 85 143 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01116 Pte-Chr1 30121408 30122561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01116 48 224 TCP Transcription Factor Family AT1G67260 39.896 7.26e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte1g01116 TCP 6.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01116 - - vvi:104881610 231.106