Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01085 ATGAAACAAGCAAGCAAAGGAAAAGATGGTGAGGCCGAAGTAGAGGATCTTCTAGATGTTCTCTTAAGATATCAGCATCCCAATGAAGATCACTTTTACTTGACAACAGACAATATTAAGGCTATTATTATGGAGGTGTTTACTGTTGGAGGTGACACAGTTGCCACAGTTATTGAATGGGCAATGTCAGAGATGATGAAAAATCCCAGGATGATGACAAAAGCACAAACTGAAGTTAGAGAGACTTTTGATAAAATTGGCAAAGTTGATGAAACAGGCATCTCAGAACTGCATTACCTCAAGTTAGTTGTCATGGAAACTTTGAGATTGCACCCTCCTGCCCCACTTATGCTAACGAGAGAGTCTGTACAGGCCTGTAAAATTGGTGGATATGACATTCCAAAGAAAATCAAGGTCATAGTTAATGCATGGGCAATGGGTAGAGATCCAAAGTATTGGACTGACCCAGAGAGCTTTTATCCTGAGAGATTCAGTGGTGACTCCGTGGATTATAGGGGTACCAATTTAGAGTACATTCCATTTGGAGCTGGAAGAAGAATGTGCCCCGGTATGACATATGGTGTATCAGTGGTTGAGATTGGACTAGCATCATTGTTGTACCATTTCAATTGGAAGCTTCCACGAGGAGTGAAACCTGAGGAGCTGGACATGACAGAGAGTTTTGGGGCAGTAGTTAGAAGAAAGCATGATCTTGAATTGATTCCCGTTGTTCATAGTCCTTTAGCATGA 750 0.4147 MKQASKGKDGEAEVEDLLDVLLRYQHPNEDHFYLTTDNIKAIIMEVFTVGGDTVATVIEWAMSEMMKNPRMMTKAQTEVRETFDKIGKVDETGISELHYLKLVVMETLRLHPPAPLMLTRESVQACKIGGYDIPKKIKVIVNAWAMGRDPKYWTDPESFYPERFSGDSVDYRGTNLEYIPFGAGRRMCPGMTYGVSVVEIGLASLLYHFNWKLPRGVKPEELDMTESFGAVVRRKHDLELIPVVHSPLA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01085 249 Gene3D Cytochrome P450 1 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 SUPERFAMILY Cytochrome P450 11 242 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS P450 superfamily signature 179 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS P450 superfamily signature 102 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 Pfam Cytochrome P450 13 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS E-class P450 group I signature 188 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS E-class P450 group I signature 58 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS E-class P450 group I signature 101 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS E-class P450 group I signature 142 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS E-class P450 group I signature 178 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PRINTS E-class P450 group I signature 38 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01085 249 PANTHER OS08G0105600 PROTEIN 6 247 - -
Pte1g01085 249 FunFam Predicted protein 47 240 - -
Pte1g01085 249 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 181 190 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01085 Pte-Chr1 29013836 29014872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01085 2 245 Cytochrome P450 AT1G13110 45.306 1.15e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01085 - - rcn:112202194 322.398