Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01066 ATGCAATGTGCTATGGCTGAGCTCATTAACCATCCTGACATCTTCCGAAAAGTGAGAGAGGAGATAGAAGTTGTTGTAGGGAACGCTAGACTTGTTGACGAATCAGATATGCCAAATCTTCCATATCTGCAAGCAGTTGTCAAGGAAACACTGAGACTTCACCCCCCTGGCCTCTATTATAAGTTATATGCTATCATGAGAGATCCAAAAATATGGGATGATCCAAATACATTCGAACCTGAGAGGTTCCTGGTTTCAATGGATGACAAAGACAACATGGGAGAGAATCAAAATAACAGTAATAAAAGAAAGAACTTCAACTTTGTACCATTTGGTGCAGGAAGGAGGGGGTGTCCTGGGACAGTCTTGGCATTCAATTTGATGACCGCTGCAGTTGCTTCTATGGTTCGCTGCTTTGATTGGAAAGTTGGTAAAGATGGAAAGGAAGAAAGCTTTGATATGACCTATGGATCAGGCATGTCCTTGAGCATGGCGAATCAACTTCTTTGTCTTCCTGTTTTACGGTTTTAG 531 0.42 MQCAMAELINHPDIFRKVREEIEVVVGNARLVDESDMPNLPYLQAVVKETLRLHPPGLYYKLYAIMRDPKIWDDPNTFEPERFLVSMDDKDNMGENQNNSNKRKNFNFVPFGAGRRGCPGTVLAFNLMTAAVASMVRCFDWKVGKDGKEESFDMTYGSGMSLSMANQLLCLPVLRF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01066 176 PRINTS P450 superfamily signature 10 23 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 PRINTS P450 superfamily signature 109 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 PRINTS P450 superfamily signature 45 56 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 PRINTS P450 superfamily signature 118 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 Pfam Cytochrome P450 62 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 Pfam Cytochrome P450 2 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 SUPERFAMILY Cytochrome P450 2 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 111 120 IPR017972 GO:0005506|GO:0016705
Pte1g01066 176 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 57 - -
Pte1g01066 176 Gene3D Cytochrome P450 1 58 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 Gene3D Cytochrome P450 59 166 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 PRINTS E-class P450 group I signature 1 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 PRINTS E-class P450 group I signature 108 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte1g01066 176 PRINTS E-class P450 group I signature 118 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01066 Pte-Chr1 28301147 28301747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01066 1 176 Cytochrome P450 AT2G42250 48.241 1.50e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01066 K23814 - qsa:O6P43_029509 233.417