Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01045 ATGCAATACATTTTTTACAACAACAGTTACATGGATGCACAAAATTGTGGCATTAGTAATAGTAATAGGGCTACTACGTATACTCCAGGTGCTGCTAGCTCAGCTTATAGAGGAGTCCGGAAGAGAAAGTGGGGGAAATGGGTGTCTGAGGTCCGTGAACCAGGCACCAAGAAAAGAATTTGGCTAGGGAGCTTCGAGACACCGGAAATGGCGGCGGCGGCCTACGACGTTGCGGCACTGCATTTTCGGGGACGCGATGCGAGGCTGAACTTCCCTGAATTGGTGAACAGCCTGCCCCATCCAGCAAGCAACCATGCTGAAGACATAAGAATGGCAGCACATGAGGCTGCCCTGAGGCTAAGGACTAACAAAGACCAAGTGAATGCAGCTGGTGTTTCTAGCTCAAATGGTGGTGGGGCACCCATCACAGTGAGACTCTCTCCAACTCAAATTCAGGCCATCAATGAGTCACCTCTGGATTCACCCAAGATGTGGATGCAAATGACAGAAGCACTCATGTCTGAGGAGTCTATTATGTACGCTAATAATTTTGAGAAGATGGAGTGGGAGGATATCCAACATGATTCTCTCTGGGATCCTTAG 603 0.4859 MQYIFYNNSYMDAQNCGISNSNRATTYTPGAASSAYRGVRKRKWGKWVSEVREPGTKKRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELVNSLPHPASNHAEDIRMAAHEAALRLRTNKDQVNAAGVSSSNGGGAPITVRLSPTQIQAINESPLDSPKMWMQMTEALMSEESIMYANNFEKMEWEDIQHDSLWDP* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01045 200 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Pte1g01045 200 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Pte1g01045 200 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Pte1g01045 200 PRINTS Ethylene responsive element binding protein signature 74 94 IPR001471 GO:0003700|GO:0006355
Pte1g01045 200 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Pte1g01045 200 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Pte1g01045 200 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Pte1g01045 200 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Pte1g01045 200 FunFam Ethylene-responsive transcription factor 2 34 93 - -
Pte1g01045 200 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01045 Pte-Chr1 25343681 25344313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01045 20 201 AP2-EREBP Transcription Factor Family AT1G71450 61.202 2.84e-67 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g01045 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01045 - - zju:107421318 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01045 1 25343681 25344313 Pte1g01045 1 25343681 25344313 RCT