Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01018 ATGCAGATCAGAAGATCTCTGCTAAATGAAGATGAACATGGATTTCGCAGGGCAAAACAACCAATATACTATGATGAAGGTCTAGAGCCATTTTTTATTCTGCACAAAGGCTCGAAGAACAGAACTTCAAGGCACCGAAAATCACAGAGGAGGAATGATTTACAAAAGTTATCGCCTACAAAGAAAAGGAAACTGGAGGGCAAAAAAGTAGAGGAATCTGATGATAACGCCTGTGAGCAACTGAGAATTGAAACCTTTAAGCGTGCTTGGTCAAAAATCGAATCCACCATTAAGGGTGTTTTGAGCGACTTCAATTCAGCTGCATTCGACAGAATACTTCAATGGGTTCACGAGTCCTTTGATGCTATTGAATCATCTGGAGATCTTAGTTCTAGTGAAGTTACTCGATCATTTTCTGCTGTAACAAGTCACAGTCCTAAAAGGGTGTTTGCTGGGCTGGTTGTCACCAGGAATATGGAGTTTGTTGATGATATACTGACATTCGAAGAACTTGGCCTTTCCCTGAAATCTCATGGATGCCTTGTCGCAAAGCTTTCTTCACTAGACTTTACTGTCAAAAGTGGAATTGGTGGTTGTCTAAAAGCTTTATTGAGACAGATTCTACAGAGTTCGGTAGATATTGCTGATATGTCCATCTTAGCATCATGGTACAGAGAACAAAATAAACACAGGACTCCATTGGTCTTGATAATAAATGATTTGGAACGATGTTCTGGTTCCATCTTATCTGATTTCATCCTGTTGCTGAGTGAATGGCTTGTAAAGTTGCCAATTATACTAATAATTGGGATTGCTACAACATTGGATGCGTTAAAGAAAACACTTTCGTCAAATGCAATACAGCATTTGTGCCCTTTCAAGTTTATGCTTGGATCACCAGCTGAGAGAATGGATGCAGTTGTAGAAGCTGTTCTTGTAAATCACTGTCCTCTTTTTGGCATTGGCCATAAAGTAGCCAAGTTTCTGAAAAGTTACTTCTTAAACCAGGATGGAACCTTAGCATCTTTTATCAGAGCTTTGAAGATTGCATTGTCCCTACATTTTTCATTGGAGCCTTCAAGCTTTGCACTTGGAAGTTTACTTTTTGAGGAATATTGCAAGTTTCAGGAAGGGAAATATGAAACCTCACCAGATATTGTTATGAATTATGTAGCTGATCTTCCACTGTCTGTGAGGAATCAAATAGTTGACGAGTCAGTGCATAATGTGGCTCATGGAGTTACCAATTTGATGAGAATGCAGAGGCATTGGGGCACGGCATTAATGTGCCTTTATGAAGCAGGGAAGCTTGACAACGTTCGACTGTTAGACTTATTTTCTGAGATGATAGATCCTGATTTAGACAATAACGTGGTTTCTGATATTAATGTCCAAAGAAAGAAGAATTATGATTTGTCTTTATCTAATGACCCATGCCTGAAATATTCGACTGGGAGAAGAGGTGGTTCTATTTTCCAGATAGTATGCCGAGTAAGGGGTCTATCAAAATCAATGCTACACCAGTTGATAAAGAATTGGGAAAAGCTCACTGCAGATGTTTCTGAGATCCATGAAAAAGTAAAGGAGTTGTACTCCCATGCGAGATGTGAGGATGGAATGAGTTCAAAACATTTGAGGGTACGTGCTCCAAAGAGACCTCTAAGTGCTAGGAATGGTGACGAAGTCCTGAATTCACTAGCAGTTGGCTTTATAGATTGGTTAATCAGGAATTATCGGAAGCCTATGGATTGCATCCCATTTCATGAAATTATGTGCTTCAAGGATGTTGAGAACCTTGTTTTGGCCTTAATTGGAGATCCAAGAAGAAGAGTTCAAGTGGATCTGCTTGAATCCTATAAAATGTTGAGATGTAGTTGCTGCAGCAAAAGTGGCAATACTATATTGCCATCCATGCATGATGCATCCATAATGTATCAATTGACTCAAGAGCATGGCGATCTTATCAATCTTCATGATTGGTTCCAGTCTTTTAAAACAGTTGTTATTTACAATAGGGCTAAAAGGAGTCTGAAGTCAAAACAGTCTCCTCTACCAAAGAAAAGTAAAGATATCCGTGAAGCAGGTGGCAAAAGTGCAGCATCAGTTCAAGCACGGTTTTGCAGGTCAGTGGCAGAGCTGCAGATAACAGGTCTTCTTCGGATGCCTAGCAAAAGACGTCCTGACTTTGTTCAAAGAGTATCATTTGGACTGTGA 2214 0.3975 MQIRRSLLNEDEHGFRRAKQPIYYDEGLEPFFILHKGSKNRTSRHRKSQRRNDLQKLSPTKKRKLEGKKVEESDDNACEQLRIETFKRAWSKIESTIKGVLSDFNSAAFDRILQWVHESFDAIESSGDLSSSEVTRSFSAVTSHSPKRVFAGLVVTRNMEFVDDILTFEELGLSLKSHGCLVAKLSSLDFTVKSGIGGCLKALLRQILQSSVDIADMSILASWYREQNKHRTPLVLIINDLERCSGSILSDFILLLSEWLVKLPIILIIGIATTLDALKKTLSSNAIQHLCPFKFMLGSPAERMDAVVEAVLVNHCPLFGIGHKVAKFLKSYFLNQDGTLASFIRALKIALSLHFSLEPSSFALGSLLFEEYCKFQEGKYETSPDIVMNYVADLPLSVRNQIVDESVHNVAHGVTNLMRMQRHWGTALMCLYEAGKLDNVRLLDLFSEMIDPDLDNNVVSDINVQRKKNYDLSLSNDPCLKYSTGRRGGSIFQIVCRVRGLSKSMLHQLIKNWEKLTADVSEIHEKVKELYSHARCEDGMSSKHLRVRAPKRPLSARNGDEVLNSLAVGFIDWLIRNYRKPMDCIPFHEIMCFKDVENLVLALIGDPRRRVQVDLLESYKMLRCSCCSKSGNTILPSMHDASIMYQLTQEHGDLINLHDWFQSFKTVVIYNRAKRSLKSKQSPLPKKSKDIREAGGKSAASVQARFCRSVAELQITGLLRMPSKRRPDFVQRVSFGL* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01018 737 Pfam Origin recognition complex winged helix C-terminal 608 735 IPR040855 -
Pte1g01018 737 CDD Orc3 81 735 - -
Pte1g01018 737 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 227 361 IPR045667 -
Pte1g01018 737 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 71 211 IPR045667 -
Pte1g01018 737 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 27 736 IPR020795 GO:0003677|GO:0005664|GO:0006260
Pte1g01018 737 MobiDBLite consensus disorder prediction 52 71 - -
Pte1g01018 737 MobiDBLite consensus disorder prediction 38 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01018 Pte-Chr1 22840568 22855917 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01018 25 669 Core DNA Replication Machinery Family AT5G16690 45.566 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01018 K02605 - qsa:O6P43_013945 807.364