Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01009 ATGGAAGCCGCAGTCTGCCCCTCCCCAAAGGACTACTACAAAGTTTTGGAGGTTGATTATGATGCCACTGAAGAAATTATCAGATTAAATTACCGGAAATTGGCACTGAAATGGCATCCTGACAAGCATAGAGGTGACCCTGCTGTTACTGCAAAGTTCCAAGAGATAAATGAAGCCTACAAAGTTTTGAGTGATCCTGACAAACGGTTTGACTATGATCTTACTGGCATATACGAGATTGACAAGTATACTTTGCATGAATATCTGGCAAGATTTAAAGAGCTGATTCTTACCTGCAATGGGCTTGGTATTGAGCAAACACAAATATGGTCGCAGCAGCTGGCAGAAAGTATTGAATTTGTTGATAAATAA 372 0.4032 MEAAVCPSPKDYYKVLEVDYDATEEIIRLNYRKLALKWHPDKHRGDPAVTAKFQEINEAYKVLSDPDKRFDYDLTGIYEIDKYTLHEYLARFKELILTCNGLGIEQTQIWSQQLAESIEFVDK* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01009 123 FunFam Chaperone protein DNAj, putative 3 90 - -
Pte1g01009 123 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 108 - -
Pte1g01009 123 Pfam DnaJ domain 11 73 IPR001623 -
Pte1g01009 123 PRINTS DnaJ domain signature 48 68 IPR001623 -
Pte1g01009 123 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pte1g01009 123 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pte1g01009 123 SUPERFAMILY Chaperone J-domain 8 97 IPR036869 -
Pte1g01009 123 Gene3D DnaJ domain 2 89 IPR036869 -
Pte1g01009 123 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
Pte1g01009 123 SMART dnaj_3 10 68 IPR001623 -
Pte1g01009 123 CDD DnaJ 11 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01009 Pte-Chr1 22671883 22676459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01009 12 73 C2H2 Transcription Factor Family AT1G74250 43.284 9.41e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01009 - - qsa:O6P43_030197 209.534