Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00999 ATGGGTAAGGAGAAGATTCACATTAATATCATCGTTATTGGAAATGTCGACTCTAGGAAGTCGGCCACCACAGGTCATCTCATCTACAAGCCTGGGGATATTGACAAACGTGTGATTGAGAGGTTCAAGAAGGAGGCTGCTGAGATGAACAAGCGTTCGTTCAAGTATGCTTGGATGCTTGACAAGCTAAAGGTTGAGCGTGAGTGTGGTATCACTATTGATATTGCTCTCTGGAAGTTTGAGACCACCAAGTCCTAG 258 0.4457 MGKEKIHINIIVIGNVDSRKSATTGHLIYKPGDIDKRVIERFKKEAAEMNKRSFKYAWMLDKLKVERECGITIDIALWKFETTKS* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00999 85 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 83 IPR027417 -
Pte1g00999 85 Pfam Elongation factor Tu GTP binding domain 7 82 IPR000795 GO:0003924|GO:0005525
Pte1g00999 85 PANTHER TRANSLATION FACTOR 4 84 - -
Pte1g00999 85 FunFam Eukaryotic translation elongation factor 1 alpha 1 1 85 - -
Pte1g00999 85 Gene3D - 1 85 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00999 Pte-Chr1 22357195 22357835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00999 1 84 Eukaryotic Initiation Factors Gene Family AT1G07930 86.905 1.14e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00999 K03231 - aof:109839053 150.599