LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g00993	ATGGCCGACGTAGAAGGTTTGTTAGAGGCTGCAGGATCAAGGTTTAGCTCATTACAACTTATTGGACGAGGATCATTTGGTGATGTCTATAAAGGGTTTGATAAGGATCTCAACAAAGAAGTTGCCATTAAAGTAATTGATTTGGAAGAATCGGAAGATGACATTGATGATATTCAGAAGGAAATCTCTGTTCTTTCACAATGCCGATCTCCATATATTACTGAGTATTACGGTTCCTATCTCAAGCACACTAAACTCTGGATAATAATGGAATTCATGGCCGGAGGTTCTGTTGCTGACCTACTCCAACCTGGTCTTCCTCTTGACGAATCTTCAATTGCATGCATCTTGCGTGACTTGCTGCATGCCATCGAGTACCTACATAATGAAGGGAAAATTCACAGGGATATTAAAGCTGCCAACATTCTATTGTCAGAGAGTGGCGATGTCAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACAAGGACTATTTCAAGGAGAAAGACATTTGTTGGAACACCATTCTGGATGGCCCCAGAGGTTATTCAGAATTCAGAAGGATATAATGAAAAGGCAGACATCTGGTCACTTGGGATAACAGCGATTGAGATGGCAAAAGGGGAACCTCCACTTGCTGATCTTCACCCTATGAGAGTTCTTTTTATAATACCTCGGGAGAACCCACCTCAGAGGCCAAGTGCAAAGGAACTTCTCAAACACCGTTTTATTAGGACTGCCAGGAAGAGCCCGAGGCTTCTGGAGAGAATAAGGGAGAGGCCTAAGTACCCAATAAAAGAAGGTGCAGAATCCCCTAGAAGTGGCCAGAATGGCATGAGAGAGGGCTTCGATACTGTGAAGGCAACAAGAGTGTTAAGAGCTGAAGACACTGTTCGAGCTAGTGGTCAGGGCACAGCTGTGAGAAATGTTGGATGGGACTTCAGCATCGGTGGATCCCAGAGTACAGGAACTGTTAGAAGTGCTCCACTACCTCCCCAGGTTAGAGAGAAGAGAACTGAAGCTTCAAATAATCTGGCCAGCCAAAGAAAAGCTCAAGATAATAGCCATCAAGGGGCATCTGTACATAGAAGCATGCTTAACGAGTCACCTGAAGCTTCCCTGATTAAAAATTCTAGAGATACCTTCCAAGATAAACCACAGAATAGTCGTCATGAAGATGATGAGCTGAGTGGAAATGGATCAGGGACTGTCGTTATCCGCTCTCCAAAAGGATCACAGTCCCCTCTGGGTCGTGATCGAACCACCACGCCCAGCCGCAGTTATGCTTCTTTTGAAGATGCTTCTTCCAGTGGCACTGTTGTTCTTCGTGGGCAACATGATGATTCTGACTCTCCTCGAACCCCAAGATCCAAGTTGAGGCTCCTGGAGAGAACTTCAAATTCATCATCAGAGGATAGTGCAATGAACCTTTTGGAGGCAAAGGCTGCACTTCAAGCAGGAAAAAAGAAAGCAAATTCTAGAGAGAAGTCTTCTGTGGCAAAGTACAACAATGATCTTCAAGAAGACAGGCAGAAAGAACATATTGCAACCAACTCTGATTCTTCTAGGAGATCACTTGATAGTCAGAAAGGACTTTCAAGGTCAAGGATGTCAAGTGACGATGAAGAAGGTGCAAAAGTTGCATCATCATGTGTACCGTTGGCGATGTTACTTATTCCTTCCTTAAAAGAGGCAGTTGGTGATGATCCAGAAGGATCAGCTGTACGCAGAGTTTCTAATTCGCTCATAACTTTGGAACGGAAAAAGCCTGGATCAAGTGAAATTCTCGTCAGAAGTTTGCTTCAGCGGTTGGCAAAGTCTGCACCTCTTATATCTGATCAAATTGTGATGATGCATTCATTCCTCTCGCCTCTCCCTTCTGAAAAATCTCACTTGGTATTCTTTGCAGCTCAAAAGATTCTTCTTTAG	1929	0.4386	MADVEGLLEAAGSRFSSLQLIGRGSFGDVYKGFDKDLNKEVAIKVIDLEESEDDIDDIQKEISVLSQCRSPYITEYYGSYLKHTKLWIIMEFMAGGSVADLLQPGLPLDESSIACILRDLLHAIEYLHNEGKIHRDIKAANILLSESGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQRPSAKELLKHRFIRTARKSPRLLERIRERPKYPIKEGAESPRSGQNGMREGFDTVKATRVLRAEDTVRASGQGTAVRNVGWDFSIGGSQSTGTVRSAPLPPQVREKRTEASNNLASQRKAQDNSHQGASVHRSMLNESPEASLIKNSRDTFQDKPQNSRHEDDELSGNGSGTVVIRSPKGSQSPLGRDRTTTPSRSYASFEDASSSGTVVLRGQHDDSDSPRTPRSKLRLLERTSNSSSEDSAMNLLEAKAALQAGKKKANSREKSSVAKYNNDLQEDRQKEHIATNSDSSRRSLDSQKGLSRSRMSSDDEEGAKVASSCVPLAMLLIPSLKEAVGDDPEGSAVRRVSNSLITLERKKPGSSEILVRSLLQRLAKSAPLISDQIVMMHSFLSPLPSEKSHLVFFAAQKILL*	643

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte1g00993	642	MobiDBLite	consensus disorder prediction	527	543	-	-
Pte1g00993	642	Coils	Coil	48	68	-	-
Pte1g00993	642	SMART	serkin_6	15	244	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte1g00993	642	MobiDBLite	consensus disorder prediction	446	460	-	-
Pte1g00993	642	MobiDBLite	consensus disorder prediction	383	397	-	-
Pte1g00993	642	CDD	STKc_MST3_like	13	263	-	-
Pte1g00993	642	MobiDBLite	consensus disorder prediction	488	520	-	-
Pte1g00993	642	PANTHER	STERILE20-LIKE KINASE, ISOFORM B-RELATED	228	609	-	-
Pte1g00993	642	MobiDBLite	consensus disorder prediction	337	382	-	-
Pte1g00993	642	FunFam	serine/threonine-protein kinase dst1 isoform X1	12	232	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g00993	Pte-Chr1	22296565	22304153	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g00993	1	607	MAP Kinase Kinase Kinase Kinase	AT3G15220	63.091	0.0	744

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-YSK	Pte1g00993		Pkinase	4e-60	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g00993	K08838		-	cave:132174834	816.994

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