Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00993 ATGGCCGACGTAGAAGGTTTGTTAGAGGCTGCAGGATCAAGGTTTAGCTCATTACAACTTATTGGACGAGGATCATTTGGTGATGTCTATAAAGGGTTTGATAAGGATCTCAACAAAGAAGTTGCCATTAAAGTAATTGATTTGGAAGAATCGGAAGATGACATTGATGATATTCAGAAGGAAATCTCTGTTCTTTCACAATGCCGATCTCCATATATTACTGAGTATTACGGTTCCTATCTCAAGCACACTAAACTCTGGATAATAATGGAATTCATGGCCGGAGGTTCTGTTGCTGACCTACTCCAACCTGGTCTTCCTCTTGACGAATCTTCAATTGCATGCATCTTGCGTGACTTGCTGCATGCCATCGAGTACCTACATAATGAAGGGAAAATTCACAGGGATATTAAAGCTGCCAACATTCTATTGTCAGAGAGTGGCGATGTCAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACAAGGACTATTTCAAGGAGAAAGACATTTGTTGGAACACCATTCTGGATGGCCCCAGAGGTTATTCAGAATTCAGAAGGATATAATGAAAAGGCAGACATCTGGTCACTTGGGATAACAGCGATTGAGATGGCAAAAGGGGAACCTCCACTTGCTGATCTTCACCCTATGAGAGTTCTTTTTATAATACCTCGGGAGAACCCACCTCAGAGGCCAAGTGCAAAGGAACTTCTCAAACACCGTTTTATTAGGACTGCCAGGAAGAGCCCGAGGCTTCTGGAGAGAATAAGGGAGAGGCCTAAGTACCCAATAAAAGAAGGTGCAGAATCCCCTAGAAGTGGCCAGAATGGCATGAGAGAGGGCTTCGATACTGTGAAGGCAACAAGAGTGTTAAGAGCTGAAGACACTGTTCGAGCTAGTGGTCAGGGCACAGCTGTGAGAAATGTTGGATGGGACTTCAGCATCGGTGGATCCCAGAGTACAGGAACTGTTAGAAGTGCTCCACTACCTCCCCAGGTTAGAGAGAAGAGAACTGAAGCTTCAAATAATCTGGCCAGCCAAAGAAAAGCTCAAGATAATAGCCATCAAGGGGCATCTGTACATAGAAGCATGCTTAACGAGTCACCTGAAGCTTCCCTGATTAAAAATTCTAGAGATACCTTCCAAGATAAACCACAGAATAGTCGTCATGAAGATGATGAGCTGAGTGGAAATGGATCAGGGACTGTCGTTATCCGCTCTCCAAAAGGATCACAGTCCCCTCTGGGTCGTGATCGAACCACCACGCCCAGCCGCAGTTATGCTTCTTTTGAAGATGCTTCTTCCAGTGGCACTGTTGTTCTTCGTGGGCAACATGATGATTCTGACTCTCCTCGAACCCCAAGATCCAAGTTGAGGCTCCTGGAGAGAACTTCAAATTCATCATCAGAGGATAGTGCAATGAACCTTTTGGAGGCAAAGGCTGCACTTCAAGCAGGAAAAAAGAAAGCAAATTCTAGAGAGAAGTCTTCTGTGGCAAAGTACAACAATGATCTTCAAGAAGACAGGCAGAAAGAACATATTGCAACCAACTCTGATTCTTCTAGGAGATCACTTGATAGTCAGAAAGGACTTTCAAGGTCAAGGATGTCAAGTGACGATGAAGAAGGTGCAAAAGTTGCATCATCATGTGTACCGTTGGCGATGTTACTTATTCCTTCCTTAAAAGAGGCAGTTGGTGATGATCCAGAAGGATCAGCTGTACGCAGAGTTTCTAATTCGCTCATAACTTTGGAACGGAAAAAGCCTGGATCAAGTGAAATTCTCGTCAGAAGTTTGCTTCAGCGGTTGGCAAAGTCTGCACCTCTTATATCTGATCAAATTGTGATGATGCATTCATTCCTCTCGCCTCTCCCTTCTGAAAAATCTCACTTGGTATTCTTTGCAGCTCAAAAGATTCTTCTTTAG 1929 0.4386 MADVEGLLEAAGSRFSSLQLIGRGSFGDVYKGFDKDLNKEVAIKVIDLEESEDDIDDIQKEISVLSQCRSPYITEYYGSYLKHTKLWIIMEFMAGGSVADLLQPGLPLDESSIACILRDLLHAIEYLHNEGKIHRDIKAANILLSESGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQRPSAKELLKHRFIRTARKSPRLLERIRERPKYPIKEGAESPRSGQNGMREGFDTVKATRVLRAEDTVRASGQGTAVRNVGWDFSIGGSQSTGTVRSAPLPPQVREKRTEASNNLASQRKAQDNSHQGASVHRSMLNESPEASLIKNSRDTFQDKPQNSRHEDDELSGNGSGTVVIRSPKGSQSPLGRDRTTTPSRSYASFEDASSSGTVVLRGQHDDSDSPRTPRSKLRLLERTSNSSSEDSAMNLLEAKAALQAGKKKANSREKSSVAKYNNDLQEDRQKEHIATNSDSSRRSLDSQKGLSRSRMSSDDEEGAKVASSCVPLAMLLIPSLKEAVGDDPEGSAVRRVSNSLITLERKKPGSSEILVRSLLQRLAKSAPLISDQIVMMHSFLSPLPSEKSHLVFFAAQKILL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00993 642 MobiDBLite consensus disorder prediction 527 543 - -
Pte1g00993 642 Coils Coil 48 68 - -
Pte1g00993 642 SMART serkin_6 15 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00993 642 MobiDBLite consensus disorder prediction 446 460 - -
Pte1g00993 642 MobiDBLite consensus disorder prediction 383 397 - -
Pte1g00993 642 CDD STKc_MST3_like 13 263 - -
Pte1g00993 642 MobiDBLite consensus disorder prediction 488 520 - -
Pte1g00993 642 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 228 609 - -
Pte1g00993 642 MobiDBLite consensus disorder prediction 337 382 - -
Pte1g00993 642 FunFam serine/threonine-protein kinase dst1 isoform X1 12 232 - -
Pte1g00993 642 MobiDBLite consensus disorder prediction 255 282 - -
Pte1g00993 642 SUPERFAMILY Protein kinase-like (PK-like) 12 274 IPR011009 -
Pte1g00993 642 MobiDBLite consensus disorder prediction 485 545 - -
Pte1g00993 642 MobiDBLite consensus disorder prediction 401 444 - -
Pte1g00993 642 Pfam Protein kinase domain 16 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00993 642 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pte1g00993 642 MobiDBLite consensus disorder prediction 314 328 - -
Pte1g00993 642 MobiDBLite consensus disorder prediction 311 473 - -
Pte1g00993 642 Gene3D Transferase(Phosphotransferase) domain 1 12 274 - -
Pte1g00993 642 ProSiteProfiles Protein kinase domain profile. 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00993 Pte-Chr1 22296565 22304153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00993 1 607 MAP Kinase Kinase Kinase Kinase AT3G15220 63.091 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pte1g00993 Pkinase 4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00993 K08838 - cave:132174834 816.994