Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00991 ATGACTACTGCAAAGTGGCTCCGAACTCTCATTTCTCCCCTTCCATCAAAACCCTCACCAGAGCTCGAAAGGTTCCTGGCAGCCTGTGACAAAGATGTTACCAGTGATGTGGTGCGTCGGGTGCAGATAATTTTACAGGCAATTTTTCCTAGCAGTCCTCTGGGAGAGCGTTGTGTCACTGGAAAGCTGCCAAATGCTAATGTAATGGACAACATTTGGGCTGAACAGCGAAGGTTAGAAGCCTTGAAGTTATATTACAGGGTCTTGGAAGCAATGTGCAGGGCTGAATCTCAAGTATTGCATGCTACCAATCTGACTTCACTATTAACCAATGAGAGGTTTCATAGATGTATGCTTGCCTGTTCAGCAGAGTTAGTTCTGGCAACGCACAAGACTGTCACCATGTTGTTTCCTGCTGTGTTGGAGCGCACTGGCATAACAGCTTTTGATCTTAGCAAGGTAATTGAAAGTTTTATTAGACATGAAGAATCTCTCCCAAGAGAACTAAGAAGACATCTGAATTCCTTGGAAGAACGACTTTTGGAGAGTATGGTATGGGAAAAGGGTTCATCGATGTATAATTCTTTGATAGTTGCTAGGCCTGCACTCTCAGCAGAGATAAATCGTCTAGGATTGCTGGGAGAACCAATGCCATCTTTGGATGCAATTGCCATGCAAATTAACTTCCCTTGTGCTGGGCTTCCCTCAGTGCCTTCAATGCAGAAGGTTGACAGTTTGCCTGGTCAGAATGGGGATCTCAGATCTCCAAAGCGATTATGCATGGAACTCAGAAATGTGTTAGTGGAACGGAATTCTTTCACCTCACCAGTCAAAGACCGTCTTCTACCTTTTAGCAACATTAAGTCAAAGGCACAGCTTCCTCCTTTGCAGTCAGCATTTGCCAGTCCAACAAGACCCAATCCTGGAGGTGGTGGAGAAACATGTGCTGAGACCGGAATCAATATATTTTTTGGCAAGATAGTGAAATTGGGAGCTGTCAGAATTAACGGTATGGTTGAAAGACTACAACTATCTCAGCAGATACGGGAGAATGTCTACCGACTTTTCCAACAAATACTAAACCAGAAGACATCTCTCTTCTTCAACCGTCATATTGACCAAATAATTCTATGTTGCTTCTATGGTGTTTCGAAGATTTCTCAATTGTCTTTGACTTTTCGGGAGATCATTTACAACTACAGGAAGCAACCACATTGCAAAACACAGGTTTTCCGCAGTGTATATGTCGATTGGTCACCATCATGCCACAGTGGGAGAAACGGACAGGATCATGTTGATATCATCACTTTCTACAACGAAACATTTGTTCCTTCAGTAAAATCTCTGCTGGTTGAGCTTGGCCAGAGTGGAACACCCAAAAAAAGTAATGTCAAACCAGAAGTCAATAATAACAAAGAGGCTCCATGTCCAGGATCACCAAAAGTGACTTCTTTTCCTAGCCTTCCCGATATGTCACCAAAGAAAGTATCTGCAACACACAATGTGTATGTGTCTCCTTTACGGTCATCAAAGATGGATGCTTTGATATCACATACTTCAAAGAGCTACTATGCTTGCGTGGGAGAGAGTACTCATGCATATCAGAGTCCTTCGAAGGATTTAACAGCAATTAACAACCGTTTGAACAGTACCCGAAAGGTCAGAGGTACACTCAACTTTGATGATGCTGACGCTGGTTTGGTTAGTGATTCTATGGTGGCCAATAGCCTCTATCTCCAAAATGGAAACTGTGCATCTTCATCAGGTGCACCAGTGAAATCTGAGCAACCTGACTCTTAA 1800 0.4317 MTTAKWLRTLISPLPSKPSPELERFLAACDKDVTSDVVRRVQIILQAIFPSSPLGERCVTGKLPNANVMDNIWAEQRRLEALKLYYRVLEAMCRAESQVLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVARPALSAEINRLGLLGEPMPSLDAIAMQINFPCAGLPSVPSMQKVDSLPGQNGDLRSPKRLCMELRNVLVERNSFTSPVKDRLLPFSNIKSKAQLPPLQSAFASPTRPNPGGGGETCAETGINIFFGKIVKLGAVRINGMVERLQLSQQIRENVYRLFQQILNQKTSLFFNRHIDQIILCCFYGVSKISQLSLTFREIIYNYRKQPHCKTQVFRSVYVDWSPSCHSGRNGQDHVDIITFYNETFVPSVKSLLVELGQSGTPKKSNVKPEVNNNKEAPCPGSPKVTSFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHTSKSYYACVGESTHAYQSPSKDLTAINNRLNSTRKVRGTLNFDDADAGLVSDSMVANSLYLQNGNCASSSGAPVKSEQPDS* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00991 599 Gene3D - 280 474 - -
Pte1g00991 599 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 1 597 IPR028309 GO:0006357|GO:0051726
Pte1g00991 599 MobiDBLite consensus disorder prediction 457 493 - -
Pte1g00991 599 SUPERFAMILY Cyclin-like 3 198 IPR036915 -
Pte1g00991 599 FunFam Retinoblastoma-related protein 1 270 480 - -
Pte1g00991 599 Gene3D - 1 186 - -
Pte1g00991 599 SMART RB_A_2 1 196 IPR002720 GO:0005634|GO:0051726
Pte1g00991 599 FunFam Retinoblastoma-related protein 1 1 186 - -
Pte1g00991 599 SUPERFAMILY Cyclin-like 318 464 IPR036915 -
Pte1g00991 599 Pfam Retinoblastoma-associated protein A domain 1 196 IPR002720 GO:0005634|GO:0051726
Pte1g00991 599 SMART cyclin_7 333 451 IPR013763 -
Pte1g00991 599 Pfam Retinoblastoma-associated protein B domain 320 447 IPR002719 GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00991 Pte-Chr1 22149917 22155090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00991 1 600 Core Cell Cycle Gene Families AT3G12280 75.329 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Pte1g00991 RB_A 1.3e-61 CL0065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00991 K04681 - qsa:O6P43_029726 1032.32