Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00980 ATGGGTATGTCTGCAGAAGCACAGTTCCATGTTTTGGCAGTGGATGACAGCCTTATTGATAGAAAGCTAATTGAAAGTCTTCTCAAGACATCTTCTTATCAAGTCACTGCAGTGGATTCTGGTAGCAAGGCTTTGGAATTTCTGGGGTTGAATCATGAAGAAGAGAATATTGATGACAAAGATACCTCTGCTGTTTCTTCTGACAACCATCATGTTGTCCATGTGAACTTAATTATAACAGATTATTGCATGCCAGAAATGACAGGCTATGAACTACTAAGAAAAATCAAGGAATCCAGATCTCTTAGAGATATACCCGTTGTGATCATGTCTTCAGAAAATGTTCCATCAAGAGTCAGCAGATGCTTAGAAGAGGGAGCTGAAGAATTCTTTCTAAAACCAGTTCAATTGTCAGATGTTCACAAGCTGAGACCACTGTTTGCTGGAAAAAATATCTGCGCCTAA 465 0.3914 MGMSAEAQFHVLAVDDSLIDRKLIESLLKTSSYQVTAVDSGSKALEFLGLNHEEENIDDKDTSAVSSDNHHVVHVNLIITDYCMPEMTGYELLRKIKESRSLRDIPVVIMSSENVPSRVSRCLEEGAEEFFLKPVQLSDVHKLRPLFAGKNICA* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00980 154 ProSiteProfiles Response regulatory domain profile. 10 148 IPR001789 GO:0000160
Pte1g00980 154 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 145 IPR045279 GO:0009736
Pte1g00980 154 SMART REC_2 9 144 IPR001789 GO:0000160
Pte1g00980 154 SUPERFAMILY CheY-like 9 140 IPR011006 -
Pte1g00980 154 CDD REC_typeA_ARR 11 143 - -
Pte1g00980 154 Gene3D - 10 151 - -
Pte1g00980 154 Pfam Response regulator receiver domain 11 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00980 Pte-Chr1 21782534 21784183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00980 1 145 Response Regulator Gene Family AT3G57040 72.789 2.32e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g00980 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00980 K14492 - qsa:O6P43_001477 228.794