Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00968 ATGGCAAAGAAGAGCTGGTTAAATCTGGTGAGGAAGCTGTTTATGTGGGAGACACAGCCAAGACAGGAAAAGATAGACAAGAGAAGGACATGGATATTTGGAAGGGTAACTGTCAAAATGTTACCCTCACTCACAGCCCCATCAACATCAACGGATAAACAAATGAGTGAAGCAGAAGAAGGACAGAGCAAACACGCTTTGACTATAGCCATTGCTGCTGAAGCTGCTGCTCATTTTGCTGAGCAAGTTGCTCGTTTGACAGGTATTTCAGAATCGAACAATGGTTTTAAAGAAAAGGAAGAAGAGAAGCCTGCCATTGTTGATCAAATTGAGACAACTCATTCCATATGTTTATGCCACGAGGGGATAGAAGAATCTGCAGCCATTAAAATTCAAGCTGCCTTTCGTGCTTACCTAGCAAGAAAGGCACTGCGGGCATTGAAGGGTATTGTAAAGCTTCAAGGTATAATTCGTGGCAGGCTAGTAAGACGACAAGCTGCCAGTACCTTAAAGAGCTTGCAGTCCATTGTGAGCATTCAGTCACAGGTCTGTGCAAGAATATTTCAACAGACAGCACAGAAATGCAACTATGATGAAAATGAAGAGAAGCTGAGATGGAGAGCTAAGATCATAATGATGGATTCAATCAGAGAAAGAAGGTGGGATGACAGCATTATGTCAAAGGAAGAGACCGATGTCTCTTATGTTACCAAGAAAGAAGCCATGATCAAGAGAGAAAGAATCAGAGAATATGCATTTAGGCACCGGAAATCAGCAGAAACTGAAAGAAGAAAAATGAATGGAAGATGGAGGTACTGGCTTGAGCAATGGGTGGATACCCAACTATCCAAAAGTAAAGAATTTGAAGATTTGGATTCAGTTGTAAGCTCAAACGGCAGACTGACAGAGGAAGATGAAAAAAGACAGCTAAGGTTGAGAAATATTCAGAGGGGAAATGTTACTGACGAGTTGCCTTCTCCAACATGTATGTCAAGAAAATCACTCTGTCAAAGGAAACCGTGTTCTGGAGTAGACGACAATACAATCCCAAATTCTGCAGTAATTCCAACTTACATGGCTGCAACAAAATCTGCAAAAGCAAAAGCAAGATCAACAAGCTCACCAAAACTTAGGCCAGTAGGGACTTCTGATACTTGTTCTGAAAGCTACTCACCATGTAAGAACAAGTTGTCACTTGTGTGTTCTATCAACAGCGAAGTCCCTAGCATTGACAGAATGGTCACGCATGGAGGTTTTCAGCAAAGATCTCCAAGCTTCAAAGGCATTCCAGTGGGTCCTGTAAAATCTAGCCACGAGACCTCGTTACTCAAATGGGATTAA 1341 0.4198 MAKKSWLNLVRKLFMWETQPRQEKIDKRRTWIFGRVTVKMLPSLTAPSTSTDKQMSEAEEGQSKHALTIAIAAEAAAHFAEQVARLTGISESNNGFKEKEEEKPAIVDQIETTHSICLCHEGIEESAAIKIQAAFRAYLARKALRALKGIVKLQGIIRGRLVRRQAASTLKSLQSIVSIQSQVCARIFQQTAQKCNYDENEEKLRWRAKIIMMDSIRERRWDDSIMSKEETDVSYVTKKEAMIKRERIREYAFRHRKSAETERRKMNGRWRYWLEQWVDTQLSKSKEFEDLDSVVSSNGRLTEEDEKRQLRLRNIQRGNVTDELPSPTCMSRKSLCQRKPCSGVDDNTIPNSAVIPTYMAATKSAKAKARSTSSPKLRPVGTSDTCSESYSPCKNKLSLVCSINSEVPSIDRMVTHGGFQQRSPSFKGIPVGPVKSSHETSLLKWD* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00968 446 Pfam Protein of unknown function (DUF4005) 338 404 IPR025064 -
Pte1g00968 446 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Pte1g00968 446 Pfam IQ calmodulin-binding motif 126 145 IPR000048 GO:0005515
Pte1g00968 446 MobiDBLite consensus disorder prediction 417 446 - -
Pte1g00968 446 Gene3D - 123 172 - -
Pte1g00968 446 SMART iq_5 146 167 IPR000048 GO:0005515
Pte1g00968 446 SMART iq_5 123 145 IPR000048 GO:0005515
Pte1g00968 446 PANTHER IQ-DOMAIN 5-RELATED 4 397 - -
Pte1g00968 446 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00968 Pte-Chr1 20824032 20826412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00968 1 436 IQD Protein Family AT5G13460 41.741 8.14e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00968 - - qsa:O6P43_029632 455.292