Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00963 ATGGTTGGTGCATCACTTGGAAGACGATTACTAACAAATAAAGAGGAAACGAACCAAGCCATCAACAAAAAATGGTCCAAAGTTGCTTCTCATCTACATGGAAGAACTGACAATGAAATCAAGAACCATTGGAATACACATATAAAGAAGAAACTGAAGAAGATGGGGATTGACCCTCTCACACACAAACCAATCCCTACCTCACCAAATGAACAAAGCCAGAAACCTGAACCAGCAAGAGAGCAACAGCAGCAGCTTGCTTCACTTAGTAATCCTTGCATTGAAATGAAAGAAAGCAATGAGTCTGAGACATCACACAAGTCATCAACCGTAACTGAAGCTAAAGAAGAAGACCGAACCAATGAAAACCCTTTTGACACGATGGAACTGGTGTCTAAACTCTGCACAGATGAAGTTCCAATTATAGTTCCTTCATCAGCATGTCCATCAACATCATCTTCTTCTTCTTCTTCCAAGTTAGTTTGA 486 0.4012 MVGASLGRRLLTNKEETNQAINKKWSKVASHLHGRTDNEIKNHWNTHIKKKLKKMGIDPLTHKPIPTSPNEQSQKPEPAREQQQQLASLSNPCIEMKESNESETSHKSSTVTEAKEEDRTNENPFDTMELVSKLCTDEVPIIVPSSACPSTSSSSSSSKLV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00963 161 SUPERFAMILY Homeodomain-like 17 57 IPR009057 -
Pte1g00963 161 ProSiteProfiles Myb-like domain profile. 8 48 IPR001005 -
Pte1g00963 161 MobiDBLite consensus disorder prediction 99 124 - -
Pte1g00963 161 PANTHER F14D16.11-RELATED 17 147 - -
Pte1g00963 161 CDD SANT 13 48 IPR001005 -
Pte1g00963 161 Pfam Myb-like DNA-binding domain 23 47 IPR001005 -
Pte1g00963 161 Gene3D - 8 88 - -
Pte1g00963 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 52 IPR017930 -
Pte1g00963 161 MobiDBLite consensus disorder prediction 55 131 - -
Pte1g00963 161 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00963 Pte-Chr1 20486975 20488236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00963 5 144 MYB Transcription Factor Family AT5G16600 41.379 1.62e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte1g00963 Myb_DNA-binding 7.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00963 K09422 - qsa:O6P43_020577 154.451