Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00961 ATGGGATATTTGTCTTGCAGAGCTGAATCTGCAATTTCCACCTCACGTTCTCAAACTCCATCTTCCAAAACCAATTGTCAGAAGCTAGAAAAACCCATCAAGATCCAACAGTTTGACTACAGTGACCTTGAAGCTGCCACCAATGGTTTCTCCGATCGCAAGCTTTTAGGCAAAGGTAGCCACGGACATGTCTACAAGGCTGTTGTTCATGGCCGTCCAGTTGCTGTGAAGAGAGCATCTAGAGCTCATGGCCTCATACCTAGGCCAAGTGCTTCTTCTACTTCTTCTTCTGCCGTTTTTGAAATCACCAACGAGGTAGATAATGAGATTGATATCTTGTCTAAAATTCAGAGTCCAAGATTGGTCAATCTGGTGGGTGTTTCTAATGATTCAAAGGATAGGCTTTTGGTTGTCGAGTTTATGAGTAATGGTACCCTTTATGATGTTTTGCATTCCAGCAATCGACCGCCCGGTTGGGGACGTAGAATTCGATTGGCTTTGCAAACTGCCAAGGCAATTGATACCCTTCATTCTTCAACCCCACCTGTAATTCACAGAGATATTAAGTCAGCAAACGTTTTAATTGATAGGAACTATAATGCTAGGTTGGGAGATTTTGGATTGGCTCTGCGTGGCCATGTTGATGATTATAGACTAAGGTCTACACCTCCTGCTGGCACTATTGGGTATTTGGATCCTTGTTATGTGACCCCAGATAATTTGAGCACGAAAACTGATGTCTTCAGCTTTGGGATTTTGTTGTTAGAGATGATTAGTGGGAGGAAGGCAATTGATGTGGCATATTCACCTCCTTCAATTGTAGATTGGGCTATTCCTCTCATAAAGAGAGGGAAGCTGCTGGCTGTATATGATCCAAGGATTCCACCTCCGAAGGATCCAATTGTGAGGAAGCAGTTAGCTGTCATTGCTGCAAAATGTGTGAGATCTTGTAGGGAAAGAAGGCCATCAATGAAGGATATTGTTGCCTGGCTTACTGGGTTGAGTAAATTGGTGCCTCTACATTCATGGAATAGTTTCAATAACCCCTGCATGATGGTTGAGACAATGGGATTGCCAGTTGAGACAAGGAATACTCAACTGGATTCAAGATTTGAAAGAGTTAATGCAGCTAATTTAGATGGAAACCACTCTACTTTCGCTAAGTCAATGAGTAGAAGTTCTCGGAGAGTGTATTCTGATTTGGGGTTCAGCAGCAATTTAATGGACCTCATGGCTACCACTGAGCAGTCTGGATGTCAAAGGGAAGCCAATGGCGTTGAGCTCAGATCGAGATCAGCTCGAGTTTCAAGTTCCAGATTCAGTAGCGCTAGGTATCTTAGGAGTGGAAAAAATCTATACCAAACTTGCGGTAGTGATAAAGATGCTTTCACTTTGGGTAAAAATCATTGTATTGAAGAACCTTCAGATATGCTTCAAGTGAAGATGTGA 1449 0.4272 MGYLSCRAESAISTSRSQTPSSKTNCQKLEKPIKIQQFDYSDLEAATNGFSDRKLLGKGSHGHVYKAVVHGRPVAVKRASRAHGLIPRPSASSTSSSAVFEITNEVDNEIDILSKIQSPRLVNLVGVSNDSKDRLLVVEFMSNGTLYDVLHSSNRPPGWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNYNARLGDFGLALRGHVDDYRLRSTPPAGTIGYLDPCYVTPDNLSTKTDVFSFGILLLEMISGRKAIDVAYSPPSIVDWAIPLIKRGKLLAVYDPRIPPPKDPIVRKQLAVIAAKCVRSCRERRPSMKDIVAWLTGLSKLVPLHSWNSFNNPCMMVETMGLPVETRNTQLDSRFERVNAANLDGNHSTFAKSMSRSSRRVYSDLGFSSNLMDLMATTEQSGCQREANGVELRSRSARVSSSRFSSARYLRSGKNLYQTCGSDKDAFTLGKNHCIEEPSDMLQVKM* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00961 482 ProSiteProfiles Protein kinase domain profile. 50 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00961 482 SUPERFAMILY Protein kinase-like (PK-like) 28 331 IPR011009 -
Pte1g00961 482 Gene3D Transferase(Phosphotransferase) domain 1 141 342 - -
Pte1g00961 482 FunFam Serine/threonine-protein kinase-like protein 141 344 - -
Pte1g00961 482 PANTHER OS01G0253100 PROTEIN 15 336 - -
Pte1g00961 482 MobiDBLite consensus disorder prediction 1 26 - -
Pte1g00961 482 Pfam Protein kinase domain 51 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00961 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Pte1g00961 482 MobiDBLite consensus disorder prediction 8 26 - -
Pte1g00961 482 SMART serkin_6 50 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00961 482 ProSitePatterns Protein kinases ATP-binding region signature. 56 77 IPR017441 GO:0005524
Pte1g00961 482 Gene3D Phosphorylase Kinase; domain 1 20 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00961 Pte-Chr1 20453726 20455808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00961 28 331 Receptor kinase-like Gene Family AT3G59420 43.226 3.06e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte1g00961 Pkinase 2.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00961 - - qsa:O6P43_029610 709.523