Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00942 ATGGCTTCGGCTCTCGGGAAAGAAGGGGCTGATGAGATGGTTATTGATAAACTGCCTGAGGAGATCAATGAAATGAAGATAAAGGATGAAAAGGAAATGGAGACAGCAATGGTGGACGGAAATGGAACTGAAACTGGTCATATTATCGTGACTACTATTGGAGGTCGTAATGGTCAGCCTAAGCAGGCCAAGTGTCTTGAAACAGGAGAGACTGTGGCTATCAAGAAGGTTTTGCAGGATAAAAGATATAAGAATCGTGAATTGCAAACCATGCGCCTTCTAGATCACCCCAATGTTGTGTCCCTCAAGCACTGTTTCTTTTCAACCACTGACAAAGATGAGCTTTATCTGAATTTGGTCCTTGAATATGTTCCTGAGACTGTTTATCGTGTGGTTAAGCACTACAGTAAGGCCAATCAGCGAATGCCCCTAATATATGTCAAGCTCTACACATATCAGATTTGCAGAGCTTTGGCCTATATTCATGGATGTGTTGGTGTCTGCCATAGAGACATTAAGCCACAGAATCTGCTGGTTAATCCTCATACACATCAGGTTAAGCTATGTGATTTTGGCAGTGCAAAAGTGCTGGTCAAGGGTGAGCCAAACATATCATACATTTGTTCTCGTTATTATCGTGCTCCTGAACTCATTTTTGGAGCAACTGAATATACAAGTGCAATAGACATGTGGTCTGCGGGTTGTGTCCTTGCCGAACTGCTCCTGGGACAGCCTTTATTTCCAGGTGAAAGTGGAGTTGATCAGCTTGTTGAGATTATCAAGGTACTTGGTACTCCAACTCGCGAAGAAATCAAATGTATGAATCCTAATTATACTGAGTTCAAATTCCCACAAATCAAGGCTCATCCATGGCACAAGATATTTCACAAGCGCATGCCCCCAGAAGCAGTAGATCTCGTCTCAAGGCTTCTCCAGTACTCTCCGAATCTTCGTTGCACTGCTTTGGATGCACTTACTCATCCATTTTTTCATGAGCTTCGCGACCTTAATGCTCGTCTCCCAAATGGACGTCCACTACCTCCTCTTTTTAACTTCAAACCTCAAGAACTGAAGGGAGCGTCTTTGGAGCTTCTCTGCAAGCTTATACCAGAGCATGCTAGGAAGCAGTGTCCATTTCTAAACTTTTGA 1149 0.4334 MASALGKEGADEMVIDKLPEEINEMKIKDEKEMETAMVDGNGTETGHIIVTTIGGRNGQPKQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVYRVVKHYSKANQRMPLIYVKLYTYQICRALAYIHGCVGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTSAIDMWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFHELRDLNARLPNGRPLPPLFNFKPQELKGASLELLCKLIPEHARKQCPFLNF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00942 382 SMART serkin_6 47 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00942 382 FunFam Shaggy-related protein kinase kappa 126 374 - -
Pte1g00942 382 CDD STKc_GSK3 62 333 IPR039192 -
Pte1g00942 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pte1g00942 382 Gene3D Transferase(Phosphotransferase) domain 1 126 374 - -
Pte1g00942 382 SUPERFAMILY Protein kinase-like (PK-like) 57 354 IPR011009 -
Pte1g00942 382 ProSiteProfiles Protein kinase domain profile. 46 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00942 382 Gene3D Phosphorylase Kinase; domain 1 50 125 - -
Pte1g00942 382 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 30 376 - -
Pte1g00942 382 Pfam Protein kinase domain 55 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00942 Pte-Chr1 20217784 20223370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00942 67 356 MAP Kinase Gene Family AT3G59790 33.555 9.28e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte1g00942 Pkinase 5.9e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00942 K27413 - qsa:O6P43_008947 737.258