Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00935 ATGGAAGAAGTCAAAGAGCAGCAAAGTCAGTCACTTGATCAAGACGATGACAGTGAAATTGTCGCTGAAAGTGCTGCATTTGTTAAAGGGGAGCCTCTTCAAGATAAAAGTGGCCCACCCAAAGTTGATTCTGAGGTAGAAGTCCTTCATGAGAAAGTTACCAAACAAATAATTAAGAAAGGTCATGGGCAGAAGCCATCCAAATATTCAAATTGTTTCTTGCATTACAGGGCATGGACTGAAAGCACAAAGCACAAGTTTGAGGACACTTGGGAGGAACAGCACCCAACTGAGATAGTATTAGGGAAAGAGAAGACAGAAATGACTGGCTTGGCCATGGGTGTTAACAGTATGAATTCTGGTGAGCGTGCATTATTGCATGTTGGCTGGGAGTTGGGTTATGGAAAGGATGGCAGCTTTTCCTTCCCAAATGTTCCTCCCATGGAAGATATTATATATGAAGTAGAGCTCATTGGATTTGATGAGACCAAAGAAGGAAAAGCTCGTAGTGACATGACTGTTGAGGAAAGGATCAGTGCAGCAGATCGCAGAAAGATGGATGGAAATTCATTATTTAAAGAGGAGAAGCTAGAGGACGCTATGCAACAGTATGAAATGGCCATTGCATATATGGGAGATGACTTCATGTTTCAGTTGTTTGGTAAGTATCGAGACATGGCTTTGGCTGTGAAGAATCCATGCCACCTTAACATGGCAGCATGTTTAATCAAACTGAATCGTTATGAAGAAGCCATTGGACAATGCAGCATGGTGCTGACTGAGGATGAAAACAATGCCAAGGCTCTGTTCAGGCGAGGGAAGGCTAGGGCAGCGCTGGGGCAAACAGATGCAGCCAAGGAAGATTTCCTGAAGGCACGCAAATATGCACCTGAGGACAAAGCAATTGCCAAAGAATTGCGGGTGCTTGCCGAACATGACAAGGCTGTCTATCAGAAGCAAAAAGAGATATACAAAGGAATTTTTGGACCAAGACCTGAACCAAAACTGAAGAGTAACTTTTTGGTTATCATCTGGCAGTGGTGGTTGTTAATTTTCCACCGTGTTTTGACCCTGTTCAAGCGTAATAGGAAAAAGGTGGACTGA 1104 0.4339 MEEVKEQQSQSLDQDDDSEIVAESAAFVKGEPLQDKSGPPKVDSEVEVLHEKVTKQIIKKGHGQKPSKYSNCFLHYRAWTESTKHKFEDTWEEQHPTEIVLGKEKTEMTGLAMGVNSMNSGERALLHVGWELGYGKDGSFSFPNVPPMEDIIYEVELIGFDETKEGKARSDMTVEERISAADRRKMDGNSLFKEEKLEDAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCSMVLTEDENNAKALFRRGKARAALGQTDAAKEDFLKARKYAPEDKAIAKELRVLAEHDKAVYQKQKEIYKGIFGPRPEPKLKSNFLVIIWQWWLLIFHRVLTLFKRNRKKVD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00935 367 Gene3D - 37 162 IPR046357 GO:0003755
Pte1g00935 367 FunFam Peptidylprolyl isomerase 166 294 - -
Pte1g00935 367 SUPERFAMILY FKBP-like 45 160 - -
Pte1g00935 367 SUPERFAMILY TPR-like 172 323 IPR011990 GO:0005515
Pte1g00935 367 Pfam Tetratricopeptide repeat 266 298 IPR019734 GO:0005515
Pte1g00935 367 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Pte1g00935 367 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 161 IPR001179 GO:0003755
Pte1g00935 367 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 97 336 IPR039663 -
Pte1g00935 367 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 66 158 IPR001179 GO:0003755
Pte1g00935 367 Gene3D Tetratricopeptide repeat domain 163 294 IPR011990 GO:0005515
Pte1g00935 367 SMART tpr_5 181 214 IPR019734 GO:0005515
Pte1g00935 367 SMART tpr_5 266 299 IPR019734 GO:0005515
Pte1g00935 367 SMART tpr_5 232 265 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00935 Pte-Chr1 20151610 20156656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00935 46 334 Calmodulin-binding Proteins AT5G48570 32.432 1.50e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00935 - - vvi:100253308 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00935 1 20151610 20156656 Pte1g00935 1 20151610 20156656 RCT