Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00904 ATGGCCAAAATTTCACTTCTAGCTATCCATGGTATGATTGAACTCTTCGTAGTATTCAGTTACTACGGTAGTGTTTTCCCGCCAGTTGTGTCTCTGAAGACTGAAACTGAATTGTTGCTTCAATTCAAAAGCCAACTGAAAGACCCTTTGAATGCTTTGACTTCATGGGAGGAGATGGAGTCTGCATGTGAATTCGAAGGTATTACGTGTGATCCAATTTCTGGGAAAGTCACAGAGATATCACTTGACAACAAGTCCCTCTCTGGTGAAATTTTCCCATCCATTTTCTCTCTTCCCAGTCTGAGAGTATTTTCCATGCCATCCAATTTGATATCTGGGAAGATTCCTTGGGAAATAAGTTACTGTACAAACCTTAGAGTGCTGAATCTTACAGGAAACGAAATGGTTGGAAGCATTCCTGATCTTTCTGGGCTGAGAAATCTGAAGGTCCTTGACTTGTCAATCAACTACTTCTCTGGAAGATTTCCCTCATGGCTGGGGAACTTGACTGGTTTGCTTTCTCTGGGGTTAGGTGAAAATGAATATTTAGAGACTGAAATCCCCGAGTCTCTGGGGAATTTGAAGAACTTGACTTGGCTATATCTTAGTCATTCTCACTTAGAAGGTGAAATCCCAGAATCTATTTATCAACTTAAGGCACTAAAAACCTTGGATATTTCAAGGAACAAGATTTCTGGGAAAATTTCAAGTTCCATTTCCAAGTTAGAAAGTATTTGCAAGATAGAGCTGTTTTCAAACAACTTGACCGGCGAAGTTCCACCTGAGATTGCTAATCTCACACAGCTACAGGAGATCGATATCTCGGCAAACAAATTCTACGGAAAATTGCCAACAGAAATTGAAAACCTGAAGAATTTGGTAGTATTTCAACTCTATGAGAACAACTTTTCTGGAGAACTTCCATCAGGATTTGGAGATATGCAAAATCTTGTGGGGTTCTCCATTTATCGAAATAGCTTCACCGGAACATTTCCGGAGAATTTTGGGCGATTCTCACCTTTGGAAAGCATTGACATATCTGAAAATCAATTTTCTGGTGGCTTCCCAAAATTCTTGTGTGCAAAGAGGCAGTTAAGGTATTTGCTGGCCTTGGACAACAAGTTTTCTGGGGAGTTTCCAGATATATATTCTGAATGTAAATCTCTACAGAGATTCAGAGTCAGCAAAAACAATTTGTCTGGAAAAATTGCAGATGAACTTTGGGCTCTTCCACATGCGAGAATAATTGATTTAGGCGACAATGATTTCAGTGGTGAGATATCTCGACAAATCAGACTTTCTACTAGTTTAAGTGAATTAGTTCTGACGAATAACGGGTTTTCTGGGACAATTCCATCAGAAATTGGAAAGCTGAGAAGCTTAGAGAAACTCTATCTGAGAAATAATAACTTCACTGCTCGTATACCATCTGAAATTGGTAAGCTGCAGCAATTATCTTCATTGCATTTAGAAGAAAATTCATTGACTGGACCATTACCGGTAGAGCTGATCCATTGTTCTCGACTGGTGGACATAAATCTCGCATGGAATTCTTTAACTGGCGATATCCCAAGTGATATTTCACTCATGAGTTCATTGAACTCTCTCAATCTTTCTGGAAACAAATTCTCAGGTTCTTTACCAGTGAGCTTAGAGACAATGAAGCTGAGTTCGGTCGATTTTTCCTACAACCAATTATCCGGGGAAGTTCCATCTGATCTTTTGATCACAGGAGGAGACAAAGCCTTCATAGGAAACAAAGACCTCTGTGTTGCCCATAACTCAGTGGATTCTGAACTCAGCATCTGTTCCGGAAACCTGGGTGGTCAGAAAAGAGCACTTGCTCATAAACTTGTTTTTCTTTGCATTGTTGCATCCTTCTTAGTTGCTTTCCTAGTTGGAATGCTGATTGTAAGTTGTGGGAAATTCAAGCATGGTCAAGCTACCACAGACATTGGCTTAACGGGTGAGAAAGAAGTGGAGCCAAAATGGAACCTGTCATCTTTCCACCACATAGATATTGACATGGACGAAATATGCAATCTGGAGGAAACTAATTTGATAGGGAGTGGAGCAACTGGAAAAGTTTACAGGGTGCAGCTGAAGAAAGGTAGTGCTACTGTGGCTGTAAAGCAGCTATGGATTGGGGATGGTGTTAAGATATTGGCAGGAGAGATGGAGATCATGGGAAAAATAAGGCACAGGAATATATTGAAGCTGTATGCCTGTTTACTCAAGGGAGGCTCAAAATATCTTGTATTTGAGTACATGCCAAATGGTAATCTGTTTCAAGCCCTTCACAGAAAGATCAAAGGTGGCATTGCACAACTTGACTGGTACCAGAGGTATAAAATTGCTTTGGGTGCAGCCAAGGGAATTGCTTATTTGCATCATGACTGTTCTCCATCCATTATTCACAGGGATATAAAATCCAGTAATATCTTGCTTGATGAAGATTATGAGCCCAAAATTGCAGATTTTGGCCTTGCCAGAATGATAGACAAATCTCCTAAAGGCTCATATGTTAGTTCTCTTGCAGGAACTCATGGTTACATTGCCCCAGAGCTGGCATACACACTTGAAGTGACGGAGAAAAGTGATGTGTATAGCTTTGGAGTGGTGGTGCTGGAATTAGTTACTGGTAGAAAACCAATAGAAGAGGAATTATACGGGGAAGGAAAAGATGTTGTGTACTGGGTTGTGACTCATCTCAGTGACAGAAAAACCATTGTCAAAGTTCTTGATGATAAAGTGAGATCAGAGTGTAATCAAGATGACATGATGAAACTCCTTAGGATTGGTCTTGTTTGTTGTGCAAAGCTTCCTTCTCTACGTCCTACCATGAGGGAGGTTGTCAAAATGCTACTTGATGCTGATCCTTCCCCAGTTAATGATTTTGACAAACAAGGGAAAGCTTTCATCTAA 2925 0.4031 MAKISLLAIHGMIELFVVFSYYGSVFPPVVSLKTETELLLQFKSQLKDPLNALTSWEEMESACEFEGITCDPISGKVTEISLDNKSLSGEIFPSIFSLPSLRVFSMPSNLISGKIPWEISYCTNLRVLNLTGNEMVGSIPDLSGLRNLKVLDLSINYFSGRFPSWLGNLTGLLSLGLGENEYLETEIPESLGNLKNLTWLYLSHSHLEGEIPESIYQLKALKTLDISRNKISGKISSSISKLESICKIELFSNNLTGEVPPEIANLTQLQEIDISANKFYGKLPTEIENLKNLVVFQLYENNFSGELPSGFGDMQNLVGFSIYRNSFTGTFPENFGRFSPLESIDISENQFSGGFPKFLCAKRQLRYLLALDNKFSGEFPDIYSECKSLQRFRVSKNNLSGKIADELWALPHARIIDLGDNDFSGEISRQIRLSTSLSELVLTNNGFSGTIPSEIGKLRSLEKLYLRNNNFTARIPSEIGKLQQLSSLHLEENSLTGPLPVELIHCSRLVDINLAWNSLTGDIPSDISLMSSLNSLNLSGNKFSGSLPVSLETMKLSSVDFSYNQLSGEVPSDLLITGGDKAFIGNKDLCVAHNSVDSELSICSGNLGGQKRALAHKLVFLCIVASFLVAFLVGMLIVSCGKFKHGQATTDIGLTGEKEVEPKWNLSSFHHIDIDMDEICNLEETNLIGSGATGKVYRVQLKKGSATVAVKQLWIGDGVKILAGEMEIMGKIRHRNILKLYACLLKGGSKYLVFEYMPNGNLFQALHRKIKGGIAQLDWYQRYKIALGAAKGIAYLHHDCSPSIIHRDIKSSNILLDEDYEPKIADFGLARMIDKSPKGSYVSSLAGTHGYIAPELAYTLEVTEKSDVYSFGVVVLELVTGRKPIEEELYGEGKDVVYWVVTHLSDRKTIVKVLDDKVRSECNQDDMMKLLRIGLVCCAKLPSLRPTMREVVKMLLDADPSPVNDFDKQGKAFI* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00904 974 Gene3D Phosphorylase Kinase; domain 1 680 760 - -
Pte1g00904 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 757 971 - -
Pte1g00904 974 Gene3D Transferase(Phosphotransferase) domain 1 761 969 - -
Pte1g00904 974 FunFam Leucine-rich receptor-like protein kinase family protein 672 756 - -
Pte1g00904 974 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Pte1g00904 974 SUPERFAMILY RNI-like 248 572 - -
Pte1g00904 974 SUPERFAMILY Protein kinase-like (PK-like) 676 955 IPR011009 -
Pte1g00904 974 SUPERFAMILY L domain-like 34 287 - -
Pte1g00904 974 CDD STKc_IRAK 688 955 - -
Pte1g00904 974 Gene3D Ribonuclease Inhibitor 320 598 IPR032675 -
Pte1g00904 974 Pfam Leucine rich repeat 146 207 IPR001611 GO:0005515
Pte1g00904 974 Gene3D Ribonuclease Inhibitor 243 319 IPR032675 -
Pte1g00904 974 ProSiteProfiles Protein kinase domain profile. 682 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00904 974 Pfam Leucine Rich Repeat 221 242 IPR001611 GO:0005515
Pte1g00904 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Pte1g00904 974 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Pte1g00904 974 SMART serkin_6 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00904 974 SMART LRR_typ_2 458 482 IPR003591 -
Pte1g00904 974 SMART LRR_typ_2 194 218 IPR003591 -
Pte1g00904 974 SMART LRR_typ_2 530 554 IPR003591 -
Pte1g00904 974 SMART LRR_typ_2 266 290 IPR003591 -
Pte1g00904 974 SMART LRR_typ_2 145 169 IPR003591 -
Pte1g00904 974 FunFam Receptor-like protein kinase HSL1 292 599 - -
Pte1g00904 974 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pte1g00904 974 Gene3D Ribonuclease Inhibitor 183 242 IPR032675 -
Pte1g00904 974 Gene3D Ribonuclease Inhibitor 31 182 IPR032675 -
Pte1g00904 974 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 215 955 - -
Pte1g00904 974 Pfam Protein kinase domain 683 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00904 974 FunFam Probable inactive receptor kinase RLK902 32 189 - -
Pte1g00904 974 SMART LRR_sd22_2 266 292 - -
Pte1g00904 974 SMART LRR_sd22_2 218 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00904 Pte-Chr1 19180655 19184091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00904 9 975 Receptor kinase-like Gene Family AT1G72180 53.571 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte1g00904 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00904 - - qsa:O6P43_029963 1304.27