Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00899 ATGAGGGGATTTTGTAACTGTGAGCTTTGTGGGAAGAGAGTAAAGACGTACTGTGAATCAGACAAGGTGAAGTTATGTTGGGACTGTGACCAGAAAGTTCATGGTGCAAACTTTCTGGTAGCGAAGCACTTAAGATGTCTTCTTTGCCACGCCTGCCAATCTCCAACTCCATGGAAAGCGAATGGACCTAAGCTATTACCCACTGTTTCATTCTTTGAGGGTTGTGTTGATATTCATAAGACCAACATAAATGATCTTGATGAAGACCGTGATAATCATTACCAGCTTGATCATGCTTCTAGTGATGATGATAATAACGATGATGGTGAGTACAGCTCTGTCAGTGACTATGAAGAACATGAATTTGATGGCAGTGGTGATGATAGTTCGGAAGAGGAAGGAGACAACCAGGTCGTGCCATTAACTTTTGACAGTGCTTCGTCTCCAGCTCATGTGTTGAATTGTTCCAATAGCGATGAATATCGTGTAAACAAGAGGACACGGACTCATCATTTCTGA 519 0.422 MRGFCNCELCGKRVKTYCESDKVKLCWDCDQKVHGANFLVAKHLRCLLCHACQSPTPWKANGPKLLPTVSFFEGCVDIHKTNINDLDEDRDNHYQLDHASSDDDNNDDGEYSSVSDYEEHEFDGSGDDSSEEEGDNQVVPLTFDSASSPAHVLNCSNSDEYRVNKRTRTHHF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00899 172 MobiDBLite consensus disorder prediction 94 150 - -
Pte1g00899 172 SMART bboxneu5 2 48 IPR000315 GO:0008270
Pte1g00899 172 CDD Bbox1_BBX-like 7 48 - -
Pte1g00899 172 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00899 Pte-Chr1 18843326 18843844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00899 7 144 C2C2-CO-like Transcription Factor Family AT5G54470 49.275 1.60e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00899 - - csav:115695974 156.762