Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00888 ATGCTCACTCGGGAAATGGTGAAGAAGCTCAATGCGTTGGCCTTGCCTGATGGTACGACATTTGACCACCCAATTGTGTGTCCGATGGGGGCATATGCACCTGCTATGAGTTCTTTGAAGTTGCCACCGATGCTTATGGTGATAGCAGAGAAAGACTTGCTTCGTGACTGGGGGTTGGAGTACTGTGAGGCATTGCAAAAATTTGGGAAGGATGTTTAA 219 0.4795 MLTREMVKKLNALALPDGTTFDHPIVCPMGAYAPAMSSLKLPPMLMVIAEKDLLRDWGLEYCEALQKFGKDV* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00888 72 Gene3D alpha/beta hydrolase 1 72 IPR029058 -
Pte1g00888 72 Pfam alpha/beta hydrolase fold 1 72 IPR013094 GO:0016787
Pte1g00888 72 SUPERFAMILY alpha/beta-Hydrolases 2 72 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00888 Pte-Chr1 18003591 18004636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00888 15 72 Carbohydrate Esterase AT3G05120 37.931 4.02e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00888 - - twl:119995362 103.605