Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00887 ATGTTATATGCACTTTTTATGGGAGTTAATTATGTTTTTGGTCCTCTAAGTTTGGCCATAGTATCGATTTCATACCTCAGCGTCGATCGCACATTTTCTGGACCCCCGGAAGTCAAGTTTCAAGTTCAACCCATCCCTCCACACCAGGACTTTAAAGACGGAGTGGCCACTCGTGATGTTGTAATCAATTCCCAAACTGGTATCACTCTCAAGATTTACATCCCGGAGATTGATAACACCATGGCTACATTTTCAAACAAGTTTCCGATTCTTCTTCATCACCATGGTGGTGGATTTTGCTTTAGCCACCCTGTTTGGTTTCTCTATTACCAGTTTTTGTCAAGGCTCGTTTGCATGGCTCGAGTTGACTGTGTCTCTGTCTACTTGCCATTAGCTCCTGAGTACAAGCTTCCTGCTACATGTGACGCTGCTTATTCTGCTTTCCTATGGCTTCGCAATGTTGCTAGCAAAGCTCAGCTGAGTCTTGACTTCAGCGGTATGGTGATTTCAATCGAGTTTGTCTTGTTGGTGAGAGCGCTGGTATAG 546 0.4414 MLYALFMGVNYVFGPLSLAIVSISYLSVDRTFSGPPEVKFQVQPIPPHQDFKDGVATRDVVINSQTGITLKIYIPEIDNTMATFSNKFPILLHHHGGGFCFSHPVWFLYYQFLSRLVCMARVDCVSVYLPLAPEYKLPATCDAAYSAFLWLRNVASKAQLSLDFSGMVISIEFVLLVRALV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00887 181 Pfam alpha/beta hydrolase fold 91 168 IPR013094 GO:0016787
Pte1g00887 181 Gene3D alpha/beta hydrolase 17 170 IPR029058 -
Pte1g00887 181 PANTHER ARYLACETAMIDE DEACETYLASE 51 167 - -
Pte1g00887 181 SUPERFAMILY alpha/beta-Hydrolases 34 156 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00887 Pte-Chr1 18002589 18003453 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00887 54 151 Carbohydrate Esterase AT1G68620 38.776 2.69e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00887 - - jre:109019753 166.392