Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00879 ATGTACTATAAGGTTTTGATTGCTAATATTGAGGAGTATGCACCCATAGTATACACTCCCACTGTGGGTTTGGTCTGCCAAAACTATAGTGGTTTATTCAGAAGGCCGAGAGGGATGTATTTTAGTGCTGAGGATCGGGGTGAAATGATGTCTATGGTTTACAACTGGCCATCTGAACAGGTTGATATGATTGTGGTGACAGATGGAAGTAGAGTGTTGGGTCTTGGAGATCTTGGAGTTCATGGAATTGGCATTGCAATAGGAAAGCTGGACTTATATGTTGCTGCTGCAGGGATAAATCCTCAAAGGGTGCTTCCTGTCATGATTGATGTTGGGACCAACAATGAGAAGCTTCTGAAGGATCCCTTGTATCTGGGGTTGCAAGAATATCGTCTCGATGGGGATGAGTATCTTGCTGTTATTGATGAATTCATGGAGGCTGTGTTTACTCGTTGGCCACATGTAATTGTGCAGTTTGAAGATTTTCGAAGTAAGTGGGCTTTGAACTTGTTACAACGATACAGGCATAACTACAGGATGTTTAATGATGACGTACAGGGAACAGCTGGAGTTGCCATTGCTGGTCTTTTAGGAGCTGTAAGAGCACAAGGAAGGCCAATGATAGATTTCCCAAAGCAAAAAATTGTTGTTGCTGGTGCTGGCAGTGCAGGGATTGGTGTTCTCAATGCTGCAAGGAAAACTATGGCAAGGATGTTGGGGAATAATGAAAGAGCTTTTGAAAGTGCTAGGAGTCAATTCTGGGTAGTTGATGCTAAGGGACTTATTACTGAGGATCGTGAAGACATAGATCAAGATGCATTGCCTTTTGCAAGGAAAGTCAAAGAGATAGAACGTCAAGGATTACATGAAGGTGCAAGCCTTGAGGAAGTGGTTAGACAAGTAAAGCCTGATGTGCTGCTGGGATTGTCTGCTGTTGGTGGACTGTTCACCAAAGAGGTGTTGGAGGCTCTCAAAGAATCAACATCAACTAGGCCTGCTATATTTCCCATGTCAAACCCAACAAAAAATGCTGAATGCACTCCTGAAGAAGCATTCTCTATTATGGGGGACAATATAATTTTTGCAAGTGGGAGCCCATTCAAGGACGTAGATCTTGGAAATGGTCATGTAGGTCACTGCAACCAAGGAAACAACATGTACCTTTTTCCTGGAATTGGACTTGGAACCCTTTTATCTGGCTCTAGGGTCGTTTCTGATGGTATGCTGCAGGCTGCGGCTGAATGCTTAGCAGCTTATATGACGGATGAGGAAGTTCTCAAAGGAATTATATACCCTCCAATATCCAAAATTCGAGATATAACAAAGGAGGTAGCTGCTGCTGTTATTACGGAAGCCATAAAAGAAGATCTGGTTGAGGGATACCGAGAAATGGATGGCCGAGAGTTACGGAAACTCAATGAGGAAGAAATTAGAGAATATGTGGATAACAACATGTGGAGTCCCGAATATCCAACTTTAGTTTATAAGAAAGATTGA 1497 0.4275 MYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPSEQVDMIVVTDGSRVLGLGDLGVHGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQEYRLDGDEYLAVIDEFMEAVFTRWPHVIVQFEDFRSKWALNLLQRYRHNYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNERAFESARSQFWVVDAKGLITEDREDIDQDALPFARKVKEIERQGLHEGASLEEVVRQVKPDVLLGLSAVGGLFTKEVLEALKESTSTRPAIFPMSNPTKNAECTPEEAFSIMGDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRVVSDGMLQAAAECLAAYMTDEEVLKGIIYPPISKIRDITKEVAAAVITEAIKEDLVEGYREMDGRELRKLNEEEIREYVDNNMWSPEYPTLVYKKD* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00879 498 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 1 184 IPR046346 -
Pte1g00879 498 PANTHER MALIC ENZYME-RELATED 1 490 - -
Pte1g00879 498 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 185 494 IPR036291 -
Pte1g00879 498 Gene3D - 1 182 IPR037062 GO:0004471
Pte1g00879 498 ProSitePatterns Malic enzymes signature. 181 197 IPR015884 GO:0004471
Pte1g00879 498 Pfam Malic enzyme, N-terminal domain 2 175 IPR012301 GO:0004471
Pte1g00879 498 Gene3D - 183 498 - -
Pte1g00879 498 Pfam Malic enzyme, NAD binding domain 185 452 IPR012302 GO:0051287
Pte1g00879 498 PIRSF ME 1 496 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 SMART malic_2 1 175 IPR012301 GO:0004471
Pte1g00879 498 SMART Malic_M_2 185 453 IPR012302 GO:0051287
Pte1g00879 498 CDD NAD_bind_1_malic_enz 185 488 - -
Pte1g00879 498 PRINTS Malic enzyme signature 97 119 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 PRINTS Malic enzyme signature 156 174 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 PRINTS Malic enzyme signature 215 231 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 PRINTS Malic enzyme signature 61 90 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 PRINTS Malic enzyme signature 329 345 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 PRINTS Malic enzyme signature 1 23 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 PRINTS Malic enzyme signature 181 197 IPR001891 GO:0004470|GO:0004471
Pte1g00879 498 FunFam Malic enzyme 183 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00879 Pte-Chr1 17597424 17621712 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00879 K00028 - pop:7483786 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00879 1 17597424 17621712 Pte3g01124 3 9609028 9611491 RCT
Pte1g00879 1 17597424 17621712 Pte1g00879 1 17597424 17621712 RCT