Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00872 ATGGAGTTCAACCAAGGAACTCCACAAGGACATGCACGTCGGAAAGGCATAGGCCCAAGGCTATGGCTAGTAATATCAGAATCAGGTGAGTCTCATGTTGAGGAAGTTGGGAAACACTCCATAATGAGACGGACTGGGTTGCCAGCTCGTGATCTTCGAGCATTAGATCCAGTACTATCTTACCCTTCATCGATTCTAGGACGAGAAAGAGCCATTGTCATCAATTTGGAGCACATCAAAGCCATTGTTACAGCAAAAGAAGTTCTATTGGTCAATTCTTCCAACCCACTCGTGGTCCAATTCATTGAAGACCTCAAGGAACGTATTGTGGGTTCTACGCGCCAACAGGAGGAGATGGGGAAAGGAAGTGCGGCTAAATCTGGAGATCATGAGTCACCTTTATCACATGGTTATTATGGTTCTCATGTTGATGATGTGAAGACGCCAGAAGGTGTAGCTCCCAAGTTGTTACCCTTCGAGTTCCGAGCACTTGAAGCTTGTCTTGAATCTGCATGCAGGTGCCTTGAATCTGAGACAGCCACCTTAGAAGAAGAGGCATATCCAGCTCTGGATGAATTGACTGCCAAAATTAGTACACTAAACTTGGAGCGAGTTAGACACATCAAGAGTCGTATGGTCGCAATATCTGGTCGAGTACAAAAGGTGAGAAATGAACTTGAGCATCTATTGGACGATGACAATGACATGGCAGAGATGTACTTAACTGAAAAGCTATTCAGTCGTTCTATAGATCGGTTGACAAATAGAGACGAAGAATATAATGCTTTAACCAATGAAGACTGTGACAGTGGGCCTGACATATTAGAGAGCCACTCTGAGGATTCACTTTGTTTGAAGCCCAATATCAGTGAACTGGAGATGCTTTTGGAAGCTTATTTTGCACAGACAGATGGAACCTTGCAGAAGTTGTCTCATATGAGTGAGTACGTAGATGACACAGAAGACTACATCAACATAATGTTGGATGATAAGCAAAATCAGCTGCTACTCATGTCAGTGAATCTCAACGCTCTAAACATGTTCCTCAATGCTGGCATCGTCGTTGTGGGGTTGTTTGGCATGAACATTCATATTCCACTCTTCGATGCTGAGCCCACCAAGTTTTGGCAAACTACATATGGTACAGTAGCTGGAATAGTTGGCTTATACGTCATTGCCTTTGCTTGGGGCAGGAAAAGATATCAGGTGGCATAA 1215 0.4387 MEFNQGTPQGHARRKGIGPRLWLVISESGESHVEEVGKHSIMRRTGLPARDLRALDPVLSYPSSILGRERAIVINLEHIKAIVTAKEVLLVNSSNPLVVQFIEDLKERIVGSTRQQEEMGKGSAAKSGDHESPLSHGYYGSHVDDVKTPEGVAPKLLPFEFRALEACLESACRCLESETATLEEEAYPALDELTAKISTLNLERVRHIKSRMVAISGRVQKVRNELEHLLDDDNDMAEMYLTEKLFSRSIDRLTNRDEEYNALTNEDCDSGPDILESHSEDSLCLKPNISELEMLLEAYFAQTDGTLQKLSHMSEYVDDTEDYINIMLDDKQNQLLLMSVNLNALNMFLNAGIVVVGLFGMNIHIPLFDAEPTKFWQTTYGTVAGIVGLYVIAFAWGRKRYQVA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00872 404 FunFam Magnesium transporter MRS2-E 97 335 - -
Pte1g00872 404 Gene3D Magnesium transport protein CorA, transmembrane region 99 335 - -
Pte1g00872 404 Gene3D - 18 94 - -
Pte1g00872 404 MobiDBLite consensus disorder prediction 112 139 - -
Pte1g00872 404 CDD Mrs2_Mfm1p-like 22 400 IPR039204 -
Pte1g00872 404 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 399 IPR039204 -
Pte1g00872 404 FunFam Magnesium transporter MRS2-1 10 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00872 Pte-Chr1 17038448 17040784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00872 22 400 MRS2 Gene Family AT3G19640 50.461 5.74e-126 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00872 - - csin:114265556 469.544