Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00868 ATGGCGGCCCCCCATGGCAATGTATTGTTTGCAGTTATTGTCATCATTCTCATTGTTCCAAATTTGCACACGACCATTGCAACGCCCACCAAGGCTACTAGTTTGAAAACGTACAAGGCATACATAAGAAATGCCTGCAATTCAACAACGTATCCAAGTGTTTGCTACAAATCCCTGTCAAACTTCGCTTCAAATATTAAAACAAACCCTCGAAGACTTGTCATTACGTCTGTTTCAGTAGCATTGAAAGCAGCACAGAATGTATCGTCTGCAATGTCAAAGCTATCAACCCAGAAGGGACTAAGGAATGTGGAAGCTAAGATCCTTTCAGATTGCGTAGAGAACATACAAGATACTGTTAGTGAACTACAGCAATCAATGGATGGCTTGAAACACTTGGGTGGTCCGTACGTACAAGATCAATTGAAGGATATAAGGACATGGATGAGTGCTGCAAGAACAGACGAGGATACTTGTACCGATGATTTTGATGGTCAGAAGGTAAGCAAAGCATTTAAAAAGAACGTCACAGGTGGCGTCGCTGTTATTACTGCACTCACTAGCAATGCCTTAAGTCTTCTTAATCGACTTGTTGTGAATTAG 603 0.4163 MAAPHGNVLFAVIVIILIVPNLHTTIATPTKATSLKTYKAYIRNACNSTTYPSVCYKSLSNFASNIKTNPRRLVITSVSVALKAAQNVSSAMSKLSTQKGLRNVEAKILSDCVENIQDTVSELQQSMDGLKHLGGPYVQDQLKDIRTWMSAARTDEDTCTDDFDGQKVSKAFKKNVTGGVAVITALTSNALSLLNRLVVN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00868 200 Pfam Plant invertase/pectin methylesterase inhibitor 41 193 IPR006501 GO:0004857
Pte1g00868 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 197 IPR035513 -
Pte1g00868 200 Coils Coil 113 133 - -
Pte1g00868 200 CDD PMEI-like_3 45 197 - -
Pte1g00868 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 193 - -
Pte1g00868 200 NCBIfam pectinesterase inhibitor domain 22 197 IPR006501 GO:0004857
Pte1g00868 200 FunFam Pectinesterase 38 198 - -
Pte1g00868 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 198 IPR035513 -
Pte1g00868 200 SMART PMEI_2 37 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00868 Pte-Chr1 16914723 16915325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00868 40 197 Carbohydrate Esterase AT3G14310 27.950 5.54e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00868 - - qsa:O6P43_001667 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00868 1 16914723 16915325 Pte1g00868 1 16914723 16915325 RCT