Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00844 ATGTCTTACATTGAAAAGATTCTGCATGCCGGAAGTACCAATAAAAATGCTTTTAAAGCACTCATTGCAGCGGAGTACTCTGGGGTCAATGTTGAGTTGGTCAAGAATTTTGAAATGGGTGTTTCTAATAAAACTCCTGAGTTTCTTAAAATGAATCCTATTGGAAAGGTCCCTGTGCTGGAAACATCGGAGGGTCCTATCTTTGAAAGCAATGCTATTGCACGTTATGTTGCTCGCTTGAAGGATGATAATTCTCTTTATGGAACATCATTGATTGAATATGCCCATATTGAGCAGTGGATTGATTTTGCATCACTAGAGATTGATGCCAACATTTTGCGATGGTTTGTACCACGCATTGGTTTTGCTGTGTATCTTCCACCTGCTGAGGAAGCAGCAATTTCTGCACTGAAAAGGGCACTAGGAGCTTTAAACACTCATCTTGCTTCTCACACTTACTTAGTTGGACATTCTGTTACATTGGCTGATATTGTCCTTACTTGCAATCTAACTCTAGGATTTAGTCGTATCTTGACCAAGAGTTTTACTTCTGAATTCCCTCATGTTGAGAGATACTTCTGGACAATGGTTAATCAGCCAAATTTCCGCAAAGTACTGGGTGAGGTGAAGCAAACAGAATTTGTGCCACCCATTCAGTCAGCAAAGAATCCTTCACGGCAAAAAGAGTCCATGAAACCTAAGGCGGTTGAAGTAAAGAAGGAAGCGAAAAAAGAAGTTAAGAAAGAAACTCCAAAGCCTAAGGCAGAAGAGACTGGTGAGGAGGAGGAGGCACCCAAGCCTAAACCAAAGAATCCTCTTGATCTGTTGCCTCCTAGCAAGATGATTTTGGATGAATGGAAAAGGTTGTACTCAAATACAAAGTCTAATTTCCGCGAAGTTGCAATTAAAGGATTTTGGGACATGTATGATCCCGAGGGTTACTCACTTTGGTTCTGCGATTACAAGTACAATGACGAGAACACTGTCTCATTCGTTACTTTGAATAAGGTTAGTGGTTTTCTGCAACGAATGGATTTGGCACGTAAATATGCCTTTGGTAAGATGCTGATAATTGGCTCAGAGCCGCCATTCAAAGTTAAGGGATTGTGGCTCTTCCGTGGAAAAGATATTCCACAATTTGTTATGGATGAGTGCTATGATATGGAGTTGTATGAATGGATGAAAGTTGACATCGACGACGAAGCTCAGAAGGAGCGTGTCAGTCAGATGATTGAAGATCACGAGCCTTTTGAGGGAGAAGCTTTACTGGATGCTAAATGCTTCAAATGA 1290 0.4101 MSYIEKILHAGSTNKNAFKALIAAEYSGVNVELVKNFEMGVSNKTPEFLKMNPIGKVPVLETSEGPIFESNAIARYVARLKDDNSLYGTSLIEYAHIEQWIDFASLEIDANILRWFVPRIGFAVYLPPAEEAAISALKRALGALNTHLASHTYLVGHSVTLADIVLTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNQPNFRKVLGEVKQTEFVPPIQSAKNPSRQKESMKPKAVEVKKEAKKEVKKETPKPKAEETGEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGKDIPQFVMDECYDMELYEWMKVDIDDEAQKERVSQMIEDHEPFEGEALLDAKCFK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00844 429 Gene3D Glutaredoxin 5 77 - -
Pte1g00844 429 CDD GST_C_EF1Bgamma_like 93 213 - -
Pte1g00844 429 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 269 429 IPR036433 GO:0003746|GO:0006414
Pte1g00844 429 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 269 429 IPR001662 GO:0003746|GO:0006414
Pte1g00844 429 Gene3D - 83 220 - -
Pte1g00844 429 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 6 429 IPR044628 GO:0004364
Pte1g00844 429 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Pte1g00844 429 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Pte1g00844 429 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Pte1g00844 429 Pfam Glutathione S-transferase, C-terminal domain 131 200 IPR004046 -
Pte1g00844 429 MobiDBLite consensus disorder prediction 227 269 - -
Pte1g00844 429 FunFam Elongation factor 1 gamma 83 219 - -
Pte1g00844 429 SFLD Main (cytGST) 9 196 - -
Pte1g00844 429 MobiDBLite consensus disorder prediction 216 276 - -
Pte1g00844 429 SUPERFAMILY Thioredoxin-like 7 88 IPR036249 -
Pte1g00844 429 SMART EF1G_2 268 376 IPR001662 GO:0003746|GO:0006414
Pte1g00844 429 FunFam Elongation factor 1-gamma 1 269 429 - -
Pte1g00844 429 SUPERFAMILY eEF1-gamma domain 269 429 IPR036433 GO:0003746|GO:0006414
Pte1g00844 429 FunFam Elongation factor 1B gamma 5 77 - -
Pte1g00844 429 Pfam Elongation factor 1 gamma, conserved domain 268 376 IPR001662 GO:0003746|GO:0006414
Pte1g00844 429 Pfam Glutathione S-transferase, N-terminal domain 13 79 IPR004045 -
Pte1g00844 429 CDD GST_N_EF1Bgamma 8 80 - -
Pte1g00844 429 SFLD Glutathione Transferase (cytosolic) 9 196 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00844 Pte-Chr1 15572548 15576737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00844 7 430 Eukaryotic Initiation Factors Gene Family AT1G57720 75.708 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00844 K03233 - vvi:100246571 704.901