Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00834 ATGCAACCCACAACTTCAGGCACCAGCAGCAATATTGGTAGCGGAGGACTGAGTCGGGGTGGACTCACCCGGTTCCGCTCAGCTCCAGCCACTTGGTTGGAAGCACTCCTTGAAGAAGAAGAGCAAGAAGAGGAGGACCTGTTCAAGACAGACCAAGGTTTAACGCAGCTCCTGACGGAAAACTCAGCGTCGACAACTTCGAAAAATCCTGTCAGCTTTGCTTCGTCAGTGGATCCCAGTGTTTTCGAAACTGTTCCCTCTTCTGGGTTCTTTCGACAAAATAGTTCCCCAGCTGAATTTCTTGGAAATTCGGCGGTGTCCTCTCAAGGGTTGTTCTCAAATTATGCACTTCAACAGGATTTCGACTGTACTTCCGATGATATTGTTGTTTCTCCATCTGCTAACCGGCTTAGAGAGGCTGAGTCTCGCCTGTCTTCTATGAAACACCAATCTCAGCTGAAAGTGGAACCTGGTGTTGAGATGGCCAGTGCAGTACCAAGTTTAGTGGACAAGGAGATGGAGAAGATTTTGGAGGGTTCAGTTCCTTGTAGGGTGCGAGCCAAGCGTGGTTGCGCGACGCATCCACGGAGTGTTGCTGAAAGGGTTCGCAGGACAAGAATCAGTGATCGTATAAGGAAGTTGCAGGAGCTTGTACCGAATTTAGATAAGCAAACAAATACTGCAGATATGTTGGATGAGGCAGTTGCGTATGTTAAGTTCCTGCAACAACAAATCGAGGAGCTATCAGAGCACCAAAGGAAATGCAAATGCGTGATTAATGATGAAATAGCTGCCAAATAG 801 0.4769 MQPTTSGTSSNIGSGGLSRGGLTRFRSAPATWLEALLEEEEQEEEDLFKTDQGLTQLLTENSASTTSKNPVSFASSVDPSVFETVPSSGFFRQNSSPAEFLGNSAVSSQGLFSNYALQQDFDCTSDDIVVSPSANRLREAESRLSSMKHQSQLKVEPGVEMASAVPSLVDKEMEKILEGSVPCRVRAKRGCATHPRSVAERVRRTRISDRIRKLQELVPNLDKQTNTADMLDEAVAYVKFLQQQIEELSEHQRKCKCVINDEIAAK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00834 266 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 28 256 - -
Pte1g00834 266 MobiDBLite consensus disorder prediction 52 70 - -
Pte1g00834 266 MobiDBLite consensus disorder prediction 1 17 - -
Pte1g00834 266 FunFam Transcription factor bHLH130 family 192 260 - -
Pte1g00834 266 Gene3D - 192 263 IPR036638 GO:0046983
Pte1g00834 266 Coils Coil 231 261 - -
Pte1g00834 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 257 IPR036638 GO:0046983
Pte1g00834 266 SMART finulus 197 247 IPR011598 GO:0046983
Pte1g00834 266 MobiDBLite consensus disorder prediction 39 70 - -
Pte1g00834 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 241 IPR011598 GO:0046983
Pte1g00834 266 Pfam Helix-loop-helix DNA-binding domain 197 242 IPR011598 GO:0046983
Pte1g00834 266 CDD bHLH_AtbHLH_like 196 249 IPR045239 -
Pte1g00834 266 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00834 Pte-Chr1 15086717 15090319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00834 24 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 53.942 2.57e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g00834 HLH 3.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00834 - - cave:132189647 291.582