Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00832 ATGAGGGATAAAACATCACCTAGCTTTGTATACAAGAGAAAAAAACTGAGTACAATGACAGATAGCACAGCACCTAGCATCATATACGAGAAAGAAAAGCTGAGTATTAGGACAGACAGCACAAGACCTAGGTTTGTATACATGAGAAAGAAGCTAAGGGGAAAAAACTCCACCCCTACTGCTGAATTTTTATCAACTCTACTCAGAGGAGTTGATTCTCAGTCAGTCATTAGTTCTAATACTCGCCCTTCATTCGCCTATGATCAAGTGATAGGTTCTCAAGTGAAGCATGGCATAGAAGATGCTGGAGGTAAAAAATATCCTCATTCAAAATCAGAATCAATAAATAGAGGTTGCATTAAAGAAGGGCATGAGTTTGACCCGAAGCCCAACATGCACAAACGTTTGGGAGTTGAAAGTGCAAATGACATCTGTTCCTCATCGAAATCTAACATGAATATAGTTTCAGAGCCTACCAATACTGAGGTGGATGAACCTGGGGATTGCTCTTCCTCAAGTGTAATGGTCACAGATGCCGTGAAAGATAGAGTATCTGCAAAGGAGTTTTGTATCAATATTCTGAGAAGACACGGTCTTCTTGGAGGAGCAAATTATAACACTGAGCAAGGTGGTTCTGCTGGAGAGACGATTGATGCTAACTGGAGTAGTTGTAATAGGTCATGCAAAGCATGTGGTCAGTTAGGTAGTCCGCTGAAAATGCTTCTATGTGATCAATGTGAAGAAGCATATCATCCATCTTGCTGCAGTCTGCACATTAAAATAATTCCGGTGGACGAATGGTTTTGTTATTCATGTTTGAAGAAGAAAAGGAAGATTTTAATGGAGATGACCTCAACAAAATCACCTAGTATTACTGCAGAGACAGGTATATCTGGAAGTAGATCAGTCAGGAGTGGAGCTAGTCTAATTTCATTGATGTTGGAAGACAGTGATACATATACAACAGGTGTGCGGATTGGTAAAGGTTTTCAAGCTGATGTTCCAAAATGGTCAGGCCCAGCAACAAGTGATGATGGCAACTTTGGTGAACCAATGGAAATGGATCCTTCAGAAGCTATTAATTTGCATGAGTTTGAGCAACACAAACCCTTCAGAATCAGTTCAATTGGTAATTGGCTTCAATGCCGTGAGGCTGATGTTGCTGGCAATATATGTGGAAAATGGCGCAGGGCTCCCCTTTTTCTACTACAAGCTGAAAATTGGGAGTGCTTCTGTGCAGTCCAATGGGATCCAGTACATGCTGATTGTGCTGTACCTCAGCCAAATGAGCAACAATATGCCGGACATCCATGTCAAAGCTCAAAGGGACTCTGTTCTCACCTGCAGCTTTGCCAAGGCTCTAGCATTTTGTGTTCCAATTAA 1383 0.4143 MRDKTSPSFVYKRKKLSTMTDSTAPSIIYEKEKLSIRTDSTRPRFVYMRKKLRGKNSTPTAEFLSTLLRGVDSQSVISSNTRPSFAYDQVIGSQVKHGIEDAGGKKYPHSKSESINRGCIKEGHEFDPKPNMHKRLGVESANDICSSSKSNMNIVSEPTNTEVDEPGDCSSSSVMVTDAVKDRVSAKEFCINILRRHGLLGGANYNTEQGGSAGETIDANWSSCNRSCKACGQLGSPLKMLLCDQCEEAYHPSCCSLHIKIIPVDEWFCYSCLKKKRKILMEMTSTKSPSITAETGISGSRSVRSGASLISLMLEDSDTYTTGVRIGKGFQADVPKWSGPATSDDGNFGEPMEMDPSEAINLHEFEQHKPFRISSIGNWLQCREADVAGNICGKWRRAPLFLLQAENWECFCAVQWDPVHADCAVPQPNEQQYAGHPCQSSKGLCSHLQLCQGSSILCSN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00832 460 SMART PHD_3 227 273 IPR001965 -
Pte1g00832 460 ProSiteProfiles Zinc finger CW-type profile. 373 431 IPR011124 GO:0008270
Pte1g00832 460 ProSiteProfiles Zinc finger PHD-type profile. 225 275 IPR019787 -
Pte1g00832 460 Pfam PHD-finger 228 274 IPR019787 -
Pte1g00832 460 Gene3D - 377 435 - -
Pte1g00832 460 SUPERFAMILY FYVE/PHD zinc finger 219 278 IPR011011 -
Pte1g00832 460 MobiDBLite consensus disorder prediction 149 169 - -
Pte1g00832 460 ProSitePatterns Zinc finger PHD-type signature. 228 272 IPR019786 -
Pte1g00832 460 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A 222 294 IPR047171 GO:0006338
Pte1g00832 460 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 213 295 IPR013083 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pte1g00832 PHD 9.7e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00832 - - qsa:O6P43_017047 370.933