Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00825 ATGTCGTTCAATCAATCGCGGTCGACGACTGATAAGAGCGATACCCAGTACAGAAAAACCGGACGATCTGCAAGCTCTAATCAGCAGCGAGGATCCTCAGGTTCTTTTGGTAGGGGAAGCGTAGGCGGTGGACCTGCATCTTCACCGTCGATCACTTCCTCATCTTCACTTTCCTCTAATAGGAGTTTTAGGAAGTCGTACAACAATGCGCAAGGCGGACATAGTAGGATAAACAATCCTCCTCTGAACCCAGCCGACCTCAACAACTCTTCAGTGCAGCGTGCCGTGCAAAATGGTTCGCATGTGCAGTCACAGTTACATGGAGCATCAGATGCATCTGTTACAACTGCAACTGCCAAGCCAAGTGAAACTTCAGCAGCACCAAGTAGTGCTCAAGCTGTTCAGAAAGCTCCAATTCCTCAATCTACCCCCTTGAGCTCGCAGCATGCTCCAGTGACTTCTGCTCAAGCAGCTCCCCCGACTACAAATAAAGGAGAGGCGGCTAAGACTATGACTCTTCAATTTGGATCGTTAAATGCCAGTGTAATGAATGGAATGCAGATTCCTCCTCGCACTAGTTCAGCACCTCCAAATCTTGATGAGCAGAAGCGTGATCAGGCACACCATGAATCTTATAGAGCTGTTCCATCTTTTCCAATACCTGCTGTTCCGAAACAACAGCAGCCACCCAAAAAAGATCCTGCGACTGTTGAGCAACCTTATATTGGAGATACTCCTTCAGTGACAAAGGCTAAAAAGGATCAACAGATCCCACCTTCACCTCCTGTCAACCAAATGAACAAGCCTTCAGTTCATCCTATGACAGGAATGTCCATTCCGATGCCATTTCATCATTCACAGGGATCTGTGCAGTTTGGAGGGCATAATCCACAGATCCAGTCACAGGGTCTGTCAACAGCATCTCTTCAAATGCCAATGCCAATGCCTTTACACATGGGCAATGCTCCGCAATTGCAACAGCAGGTTTTTGTTCCAGGCCTTCAAGCTCATCATATGCCCCAGGGGCTCATGCAGGGCCAGAACATGAATTTTACTGCTCAAATGGGTCCTTTATTAGGCCCTCAGTTAGGAAACATGGGTATAAGCATGCCTCCACAATATGCCCAACAGCAGGGAGGAAAGTTTGGTGGCACTCGTAAGACTACTGTCAAGATTACCCATCCAGAGACACATGAAGTGCTGAGACTTGATAAACGGACTGACACAATTGATGGGGGTTCATCAGGTACCAGGACTCATCCAAATGCATCATTTGCTGCTTCTCATCCTATCAATTACTATCCTCCTAGTTCCTATGGTACCAGTTCGCTTTTTTTCCCACCACCTAGTTCTCTCCCATTAACTAGCAATCAGGTAACTAATTCTCAGCCATCAAGATCAAATTATCAAGCAAACCACGGACATCAAACTATTGCAGTAGTAAATCCATCATCGCATAATATGTTGCCGGCAAATAAGATTGGTCCTCAAGTGCAAGTTGTGGTTAACCAAGTAGATTGTGAACATGCCCGTGATGTCCAAAATGGTATCTCATCAACTTTATCTGGAACAACTTCCGCAATAGCAAAACCAAGTGTTAAATCTGGTATTGTGGATTCTTCGAAATCCAATTCTAGCAATACTGTTGGTGAATCTCAAATGGCAAAAGAAACAGGTCAAACTGGTTCAATGTGCTCTGCGAGAGATTCTGAAACTTCACCAGAGCAATCTAAACTTGGCAGTGATTGTTTGGTGCCACAGTCATCACCTAAGAAATCTCTGGCTGTGTCTATTAGTAAACCTACTGAAAACCATGCACCCAGTTCTTCATTGCTTTCTCCTATGAGTGAGGAATCATTGCCAGTTGTCTCCGATGGTAAAAGCAGGAATGAAACTCTCAGTAGGTCAAATTCCATGAAAGATCATCAGAAGAAGCAAGGTAGGAAAGGCCAGTTGCAGCAGGTTGGTGAGCAATCCCTTTCAGTGTCAGGTTCTCCTAGCAATGCTAGTGATAGTGTTGTACAGAATATAGTATCTGATAAAATTGTTTCTACGTCAGTGACTAGTGCAAGTGTATTAATTCCTACAGAGAAGCCATTAGGCACTGGTGATATTACCTCTGATTCTACTGCGAGAGGTTCTGTCAGTAATCCTTCTGACGTTTCTTGTGCTGGACAGTCGGAAGAGCTTTTGCTTGAAGGTGACTTATTGAAACACGGTAAGCTGGTAAAAGGAGTGGGAGATGAAGAAAAAGTTCTTGCATATTCAAATGACATTGGCAAAAGTAAGGTATCTTCAGAACCTCTTTCCTCAAATCAGATTGCTGCAAAAGATGTTTCTCAAAAGAATGCAGCTGTCAGTAATGAAGTTTCATCCTTAGAAATGGTGCAGATGGTACATGTTGAAGTTGTGAAAAATGATAGGGAACTAGTTAAGGTCGAAGAAAACTTGGACATTGATACCTCTGAGACACTGGGTTCTAAAGATTTTATCTTGGACAGTGAAAACAGTTATTCTGTTGGCAGTAAGTCGGTTTCTGCACATTCTGATGTTTCAAATCCGCAAAGTACTTCTTTCTCTTGTACTGTTCCCACAGAAACTGCCAAACATGGGAAGGATGTTGATAACTTGGGGGGTGATTTGGGTTCTCTTCCATCGTCAAGCTCTAAAGATAAACTTATAGAACAAAATAAAGCAAAAGCTGCTTCTAAATGGAAGAAGAAAAGAAAGGAAATACTTCAAAAAGCAGATGCTCTTGGGACAACTACTGATCTTTATAATGCATATAAGGGCCCTGAAGAGAGGAAAGAAGGTGTTGAACTTTCAGCTAGCAGTGAAAGCAGTATCGCTGCAAGTGTGAACCAGGTGCCTGCTGACACTGCAGAAGAAGATACTGGGGCAACTGACAGGGGTGGACAGATGAAAGTTGAACCTGAAGATTGGGAAGATGCAGCTGACATGTCTACACCAAAACTGAAAGTCACAGAGGGAAGTGAACAGGTTGGTGATGAAAGTGGAACTACTGCAAAAAAATACTCTCGAGATTTTCTAATGAAATTTGCTGAGCAATGTTCTGATCTCCCTCAAGGTTTTGAGATTACAGCAGATATTGCCGAGGTATTGATAAGTGCTAGTGTCAGCCATGCCCATCTTGTTGAGCATGATTCATATCCTAGTCCTGGGAGAACTACAGATAGGCTGAGTGGGCCATCTCGTTTAGACCGTCGTGGTAGTGGCGTCTTTGAGGATGACAGATGGAGTAAAGTTTCTGGTCCATTGGCTACAGGGAGAGATATGCGTATGGATACTGCTTTTGGAAATAATGCTGGATTTCATGCTGGTCAAGGAGGAGTTCTAAGGAACCCTCGTGCACAGAATCCCATGCCATATGCTGGAGGTATTCTCTTAGGACCAATGCAAGGAATGGGGTCTCAGGGAGGGATGCGAAGAAATAGCCAAGATGTGGAGAAGTGGCAACGTGCTAGTAATTTCCAGCATAAGGGTTTGATTCCTTCTCCTCAGACACCGTCGCAAGTGATGCACAGAGCTGAGAAGAAGTATGAGGTGGGAAAGGTAGCAGATGAAGAACAAGTGAAACAGCGGCAATTGAAAGCTATCTTAAACAAGTTAACTCCTCAAAATTTCGAGAAGCTCTTTGAGCAGGTAAAAGCAGTTAATATCGACAATGGTGTTACTCTCACTGGTGTGATATCTCAGATATTTGACAAAGCCTTGATGGAACCCACATTCTGTGAGATGTATGCCAATTTTTGTTCTCGTTTGGCTAGTGAGTTACCGGATCTAAGTGAGGATAATGAGAAGATAACTTTCAAAAGATTGCTTCTCAACAAATGTCAGGAAGAATTTGAAAGAGGTGAACGAGAGCAAGAGGAGGCCAATAAGGCTGATGACGAGAGTGAGACTAAACTGTCTCAAGAACAGAGAGAAGAGAAGAGACTAAAGGCAAGAAGGCGTATGCTGGGTAATATTCGATTGATCGGGGAGCTGTACAAGAAGAAAATGTTAACTGAGAGAATAATGCATGAGTGCATCAAGAAGTTGCTTGGTCAGTATCAGGATCCTGATGAGGAAGATGTTGAAGCTTTGTGCAAACTGATGAGCACTATTGGAGAGATGATTGACCATGCCAAGGCAAAGGAACATATGGATGCATACTTTGAGAGGATGAAATTGTTATCAAACAATATGAACTTATCTTCAAGAGTTAGATTTATGTTGAAGGATGCAATTGATTTGAGAAAGAATAAGTGGCAACAGAGGAGGAAAGTTGAAGGGCCAAAAAAGATTGAGGAAGTACATAGGGATGCTGCTCAAGAGAGGCAAGCTCAAGCTACTAGGCTGTCTCGTGGTCCTGGAATTAATCCGTCTGCTAGAAGGGCACCGATGGATTTTGGCCCGAGGTCTCCTATGATATCTCCATCTGGTGCACATTCTGGTGGATATCGGGGGTTGCCAGCTCAACCTCGTGGTTATCCTAGTCAAGATGTTCGATTCAATGATAGACAATCATTTGATGGCAGGACTTTGTCAATTCCTCTTACTCAGAAACCTACAGCTGATGGTTCCATCACTTTAGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATACGAAGTCCACATACAATGCCAGGTGCTTCTGTTGCAGATGGACCTTCTATTCCTGGTGACTCCAGAAGAATGGCTGGTCTGAATGGTTATAGTAATGTACCTGAAGGAACACATTATGGCTCAACAGAGGAGCTCATGCCAAGATCTATTCCAGACAGATTTACTTCTGCAGCTGTCTATAAACAGTCAAATGCTCCAGACCGTAATTTTAGTTTTGGCAGCCAGGATTTAAGAAATCCAGACCGAAGTGTTGATAGATCTCTTTCTGTGCCACCCACAAGAACAGAGGACTCTGTGGTCTCCCCAAATACTCCCTCAGAAAAGTTATGGCCTGAAGAACGCCTGCGGGACATGTCCATGCAAGCTATTAAAGAGTTCTACAGTGCTAGAGATGAGAAGGAAGTTGGGCTGTGTATCAAAGACTTGAATGCTCCAAGCTTCCATTCGTCCATGGTCTCACTTTGGGTCACTGACTCTTTTGAAAGGAGGGACATTGAAAGAGAGCTCCTGGCAAAATTACTGGTGAATCTTGCGAAGTCTCCAGACGGCTTTCTCAGCCAAGTGCAACTGATCAAAGGGTTTGAATCTGTTCTCACTTCTTTAGAGGACGCAGTAAATGATGCCCCCAGAGCGCCAGAGTTTCTAGGGCACTTGTTTGCGAAAGTGGTACTGGAAAATGTTATATCGTTGAAAGAGATTGGGCAATTGCTACACCAAGGGGGAGAGGAGCCTGGTCTACTTCGGGAAGCTGGTCTCGCCGGCGATGTCCTTGGAAGCATATTGGAAGCAATAAGATCGGACAGGGGGGATACTGTGTTAACAGAGATCCGTACCAAGTCTAGTTTACGGTTGGAGGACTTCCGACCCCCTGATCCTATGGTATCCAACAAGTTAGAGAAATTTATTTAA 5541 0.4407 MSFNQSRSTTDKSDTQYRKTGRSASSNQQRGSSGSFGRGSVGGGPASSPSITSSSSLSSNRSFRKSYNNAQGGHSRINNPPLNPADLNNSSVQRAVQNGSHVQSQLHGASDASVTTATAKPSETSAAPSSAQAVQKAPIPQSTPLSSQHAPVTSAQAAPPTTNKGEAAKTMTLQFGSLNASVMNGMQIPPRTSSAPPNLDEQKRDQAHHESYRAVPSFPIPAVPKQQQPPKKDPATVEQPYIGDTPSVTKAKKDQQIPPSPPVNQMNKPSVHPMTGMSIPMPFHHSQGSVQFGGHNPQIQSQGLSTASLQMPMPMPLHMGNAPQLQQQVFVPGLQAHHMPQGLMQGQNMNFTAQMGPLLGPQLGNMGISMPPQYAQQQGGKFGGTRKTTVKITHPETHEVLRLDKRTDTIDGGSSGTRTHPNASFAASHPINYYPPSSYGTSSLFFPPPSSLPLTSNQVTNSQPSRSNYQANHGHQTIAVVNPSSHNMLPANKIGPQVQVVVNQVDCEHARDVQNGISSTLSGTTSAIAKPSVKSGIVDSSKSNSSNTVGESQMAKETGQTGSMCSARDSETSPEQSKLGSDCLVPQSSPKKSLAVSISKPTENHAPSSSLLSPMSEESLPVVSDGKSRNETLSRSNSMKDHQKKQGRKGQLQQVGEQSLSVSGSPSNASDSVVQNIVSDKIVSTSVTSASVLIPTEKPLGTGDITSDSTARGSVSNPSDVSCAGQSEELLLEGDLLKHGKLVKGVGDEEKVLAYSNDIGKSKVSSEPLSSNQIAAKDVSQKNAAVSNEVSSLEMVQMVHVEVVKNDRELVKVEENLDIDTSETLGSKDFILDSENSYSVGSKSVSAHSDVSNPQSTSFSCTVPTETAKHGKDVDNLGGDLGSLPSSSSKDKLIEQNKAKAASKWKKKRKEILQKADALGTTTDLYNAYKGPEERKEGVELSASSESSIAASVNQVPADTAEEDTGATDRGGQMKVEPEDWEDAADMSTPKLKVTEGSEQVGDESGTTAKKYSRDFLMKFAEQCSDLPQGFEITADIAEVLISASVSHAHLVEHDSYPSPGRTTDRLSGPSRLDRRGSGVFEDDRWSKVSGPLATGRDMRMDTAFGNNAGFHAGQGGVLRNPRAQNPMPYAGGILLGPMQGMGSQGGMRRNSQDVEKWQRASNFQHKGLIPSPQTPSQVMHRAEKKYEVGKVADEEQVKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNGVTLTGVISQIFDKALMEPTFCEMYANFCSRLASELPDLSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADDESETKLSQEQREEKRLKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDVEALCKLMSTIGEMIDHAKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQATRLSRGPGINPSARRAPMDFGPRSPMISPSGAHSGGYRGLPAQPRGYPSQDVRFNDRQSFDGRTLSIPLTQKPTADGSITLGPQGGLARGMSIRSPHTMPGASVADGPSIPGDSRRMAGLNGYSNVPEGTHYGSTEELMPRSIPDRFTSAAVYKQSNAPDRNFSFGSQDLRNPDRSVDRSLSVPPTRTEDSVVSPNTPSEKLWPEERLRDMSMQAIKEFYSARDEKEVGLCIKDLNAPSFHSSMVSLWVTDSFERRDIERELLAKLLVNLAKSPDGFLSQVQLIKGFESVLTSLEDAVNDAPRAPEFLGHLFAKVVLENVISLKEIGQLLHQGGEEPGLLREAGLAGDVLGSILEAIRSDRGDTVLTEIRTKSSLRLEDFRPPDPMVSNKLEKFI* 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00825 1846 MobiDBLite consensus disorder prediction 183 200 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 249 272 - -
Pte1g00825 1846 Gene3D - 1653 1846 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1630 1649 - -
Pte1g00825 1846 FunFam Eukaryotic translation initiation factor 4G 1652 1845 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 531 633 - -
Pte1g00825 1846 Pfam MA3 domain 1663 1772 IPR003891 -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 649 671 - -
Pte1g00825 1846 Pfam MIF4G domain 1200 1423 IPR003890 GO:0003723|GO:0005515
Pte1g00825 1846 MobiDBLite consensus disorder prediction 45 164 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 933 986 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1503 1529 - -
Pte1g00825 1846 Coils Coil 1282 1302 - -
Pte1g00825 1846 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 367 1846 IPR045208 GO:0003743
Pte1g00825 1846 MobiDBLite consensus disorder prediction 183 283 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 866 889 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 407 426 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 942 961 - -
Pte1g00825 1846 SUPERFAMILY ARM repeat 1654 1843 IPR016024 -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 19 36 - -
Pte1g00825 1846 ProSiteProfiles MI domain profile. 1658 1782 IPR003891 -
Pte1g00825 1846 SUPERFAMILY ARM repeat 1193 1425 IPR016024 -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 412 426 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 697 720 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1423 1590 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1423 1447 - -
Pte1g00825 1846 Gene3D - 1200 1436 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 531 671 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 963 986 - -
Pte1g00825 1846 SMART ma3_7 1659 1773 IPR003891 -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1609 1653 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1 164 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 702 720 - -
Pte1g00825 1846 SMART if4_15 1200 1423 IPR003890 GO:0003723|GO:0005515
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1054 1078 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 634 648 - -
Pte1g00825 1846 MobiDBLite consensus disorder prediction 1291 1316 - -
Pte1g00825 1846 FunFam Eukaryotic translation initiation factor 4G 1200 1436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00825 Pte-Chr1 14697702 14706990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00825 886 1847 Eukaryotic Initiation Factors Gene Family AT3G60240 56.939 0.0 1010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00825 K03260 - qsa:O6P43_026879 1893.24