Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00823 ATGGCTTCCCCGTCATCACCTGTAGAAGCCACATCATCTCCTCCAGGTCCACCGTCTGCCGTGCCTTTACCATTGCCGGCACCGCCTTCGTCGCGGCGCTTGCCGCCTCCTTGTTGGTCTCATGACGAGACAGTTGCTCTCATCGATGCATATCGTGACAAGTGGTATTCTCTTGGTCGTGGAAACCTCAAGGCAACCCATTGGCAAGAGGTTGCAGATGCTGTGACTCGTCGTTGCCCCAACGTTAATCCCGCCAAAACCGCCGTGCAGTGCCGCCATAAGATGGAGAAACTTCGTAAGCGTTACCGAACCGAAATCCAGCGTGCCAGGTCCTTGCCAATATCCAGGTTTATCTCTTCTTGGGTTCACTTTAAACGTATGGATGCCATGGAGAAAGGCCCCTCTGCTCCAAAACCCGAAATTCATTCAGATAGTGGAGATGACAATGATGACCATGACGATGATGAAGATCAGGATCTGTATGAAGAATTTAAGAATGGTAATACTTCTAATACAAGAAGCTTGAACAAGTTGTCTAGGAATGGAATTGGAGGATCAGGTGGTAGTAGTAGTGGAGGATTTAGAATTAGAATTCCGACTGGAGTGAGCATAGCACAACCTGGGACTAAGTATTATGGTAGGAGTGTTGATCATAAATTTATTTCTAATGTCAATCCTAACCCTGGGTCTAACTATGGTAGTAACTTTGGTACTAGGGTTTTGAAAGAGAAGGGTAGTGTTATGTTGGGGAAGAGAGATAAGGAGAGAGACCCTGTTGGTGAAATGGTGGCTGCAATTAAGGTACTGGGTGATGGGTTTGTGAGAGTTGAGCAAATGAAGATGGAGATGGCTAGGGAGATTGAGACTATGAGAATGGATATGGAAATGAAGAGGACTGAAATGATTTTGGATTCACAGCAAAGGATTGTGGAGGCTTTTGCCAAAGCAATTTCAGAGAAGAAGAAGAAGGCTAAGAGAATGTCATCCCCGCCAGAATCATGA 1002 0.4611 MASPSSPVEATSSPPGPPSAVPLPLPAPPSSRRLPPPCWSHDETVALIDAYRDKWYSLGRGNLKATHWQEVADAVTRRCPNVNPAKTAVQCRHKMEKLRKRYRTEIQRARSLPISRFISSWVHFKRMDAMEKGPSAPKPEIHSDSGDDNDDHDDDEDQDLYEEFKNGNTSNTRSLNKLSRNGIGGSGGSSSGGFRIRIPTGVSIAQPGTKYYGRSVDHKFISNVNPNPGSNYGSNFGTRVLKEKGSVMLGKRDKERDPVGEMVAAIKVLGDGFVRVEQMKMEMAREIETMRMDMEMKRTEMILDSQQRIVEAFAKAISEKKKKAKRMSSPPES* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00823 333 Coils Coil 92 112 - -
Pte1g00823 333 FunFam Trihelix transcription factor ASIL2 39 104 - -
Pte1g00823 333 MobiDBLite consensus disorder prediction 131 146 - -
Pte1g00823 333 SMART 118neu2 46 135 IPR006578 -
Pte1g00823 333 MobiDBLite consensus disorder prediction 131 195 - -
Pte1g00823 333 MobiDBLite consensus disorder prediction 1 36 - -
Pte1g00823 333 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 320 IPR044823 -
Pte1g00823 333 MobiDBLite consensus disorder prediction 147 161 - -
Pte1g00823 333 Gene3D - 39 104 - -
Pte1g00823 333 MobiDBLite consensus disorder prediction 10 35 - -
Pte1g00823 333 Pfam Myb/SANT-like DNA-binding domain 37 130 IPR044822 -
Pte1g00823 333 ProSiteProfiles Myb-like domain profile. 39 99 IPR001005 -
Pte1g00823 333 MobiDBLite consensus disorder prediction 164 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00823 Pte-Chr1 14589241 14591580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00823 38 130 Trihelix Transcription Factor Family AT3G14180 36.559 5.86e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte1g00823 Myb_DNA-bind_4 2.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00823 - - qsa:O6P43_017256 450.284