Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00815 ATGGCAAGGATCAAGCCTCAAGCTTTGTTACAACAGAGCAAAAAGAAGAAGGCTCCTGCTCGAATAACCGTTATCACTGTTGTACTTTACAGCTTGATCCTTTTTTTGCTTGCGTCTTTCCTCTACGCTTCAGGACGATATTGGTATCGAAGGTCAAAATTTCATACGGATAATGAAATGCCAATTTCTGAGGTTGGTGATGGTTTTTCAGATATTAGGAAACACGATGTTCCTGAGTTTGCTGAAATAAAGACCTCAAAAGGCTCTATAATAATAGAACTTCACAAAGACAACTCTCCTGAAGTTGTTGATGAATTTATTGACTTGTGCCAAAAAGGGCACTTCAAGGGGAAGCTTTTCCATCGTGTAATTAAGCATTATGTGATTCACTCTGGGGAGAGTAAAGGGCTAGGAGTTACAGAAGATTGGATTTTAAGAGGAAAGGAATATAATAGACTCCACAAGAGTGTGAAACATGAGGCATTTATGCTTGGAACTTCCAAGGGCAAACATGACAATGTAGGATTCGATCTCTTCATCACAACTGCACCAATCCCAGATCTAAATGACAAGATTATTGTATTTGGCCAAGTCATACATGGAATAGAAATTGTTCAGGAAATCGAGGAAGTTGATACTGATGAACATTACCAGCCTAAAAACTCTATTGGGATTCTTGATGTGGTTCTAAGACAGAAGGTCTGA 705 0.3887 MARIKPQALLQQSKKKKAPARITVITVVLYSLILFLLASFLYASGRYWYRRSKFHTDNEMPISEVGDGFSDIRKHDVPEFAEIKTSKGSIIIELHKDNSPEVVDEFIDLCQKGHFKGKLFHRVIKHYVIHSGESKGLGVTEDWILRGKEYNRLHKSVKHEAFMLGTSKGKHDNVGFDLFITTAPIPDLNDKIIVFGQVIHGIEIVQEIEEVDTDEHYQPKNSIGILDVVLRQKV* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00815 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 189 IPR002130 GO:0000413|GO:0003755
Pte1g00815 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Pte1g00815 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Pte1g00815 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Pte1g00815 234 Gene3D - 68 234 IPR029000 -
Pte1g00815 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 81 228 IPR002130 GO:0000413|GO:0003755
Pte1g00815 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 230 IPR002130 GO:0000413|GO:0003755
Pte1g00815 234 SUPERFAMILY Cyclophilin-like 73 230 IPR029000 -
Pte1g00815 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 234 - -
Pte1g00815 234 CDD cyclophilin 83 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00815 Pte-Chr1 14344960 14348862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00815 80 228 U-box Gene Family AT5G67530 31.169 1.97e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00815 - - qsa:O6P43_007268 325.479