Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00799 ATGGAAAGGGTTCCAGAATGGAAGGCAGTTCCTCGGGCGATGCCTGTCCTAGTTGAGGTTTCAAATGGACCTACAACCTCAAGAAGAGATATTGGCGTGCCACCGAATGGACGAGATGTTTCACATTTACGCACTCTTCCATCTAAAGATGTGAATCAGATGCCAAAAGGACGTGAGATTACTAACATTCATCTCCGCTCATGGGGAGAAGTGAGTCATGTTCCTAATGTACCCATGGTTTTGGTGGGAGAAGATGGTGAGAGCTGTGATTTAAATAGTTCTCCAGAATTTGACTTGTCGACACTTCCAAGAATATGTAAAGGAAAAGCCTCTTTGCCAGAACATGAAGAACTCATGCCTGATGTTGTTTCATTTAAAGGAAGCAGCATTGATTCATTTGAAGATGTTGGTTCCACTTCCTTCCATGGAGCTAGTCATCCTCCAGAACCTGTTGATATAGATTTGATGAGAACAGTTTATGTACCTATTGGACAAAACAAATCTGAGGTCGCATGCTTAATGAAGAGCTTATCTGTGAAAGGCCCTTCCCTGGAAGATATATCAATTCGTCCTCCAATGAAGAAATGCATTCCAGCTGTTTTTCCTCCTGTAGAAAGTTTGGTGGAAGTACCAAATGACCCTGGGACTGTAACTTCACCATTATCTGTTCCACGAGCATCACATATTACAGAAAACTCTCTTCCCCCAGAATCTGACGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTTAGCCCACACAGTAGTATTGATAGTACCGGTGTTGTTACAGCCATGAGCATTGTGCATAGTTGTGCCAGTACTTATCGAAGTGATGCATTTACAAGTGATGGCATGCTAAGTATAGATAGAAACTGTGATAGTATGAAAGGAAGTGTCAGGGGTGACTCATTAGAGAGTGCAAAGACTAGTGCTAGTCGAGCAAGTGATAGTAGTGGTCTTAGCGATGACAGCAATTGGAGCAACATTACTGGTAGTGCTAAAAAGCCTCACAAAGGGAATGATCCTAGATGGAATGCTATCCTTTCCATACGAGCTCGGGATCGAATTTTGGGGATGAGTCATTTCAGACTACTCAAAAGACTTGGTTGTGGTGATATTGGAAGTGTGTATCTCTCAGAGCTAAGTGGAACTCGATGCTTCTTTGCAATGAAAGTGATGGACAAGGCATCACTTGCTAGCAGGAAAAAATTGACGAGAGCACAGACGGAAAGGGATATTTTGCAACTTCTTGACCATCCTTTTCTGCCAACTCTGTATACACATTTTGAGACGGACAGGTTTTCATGTTTAGTTATGGAATATTGTCCCGGAGGTGACCTGCACACTCTAAGGCAACGGCAACCTGGAAAGCATTTCTCAGAATATGCTGCCCGTTTTTATGCTGCCGAGGTCTTGTTAGCATTGGAATATCTTCACATGCTTGGAGTTATCTACAGAGATCTAAAACCTGAAAATGTGCTGGTCCGTGATGATGGCCACATAATGCTTTCAGATTTTGACCTTTCTCTTAGATGTGCTGTTTCACCAACACTAGTAAGGTCTGCTTTTGATTCTGATCCTTCAAAACGTGGTGGTGCATTTTGTGTTCAGCCTACCTGTATTGAGCCCTCCTCAGCGTGCATCCAGCCTGCCTGTTTTATTCCAAAGATTTTCCCTCAGAAGAGTAAGAAGTCCCGGAAACCACGTGGTGATCCTGGCCTGTCCTCCAGTGCCCTTCCAGAACTTGTTGCAGAGCCTACTCAAGCTAGATCGATGTCCTTTGTTGGAACTCATGAATATCTAGCCCCTGAAATCATCAAGGGAGAAGGCCATGGTAGTGCAGTTGATTGGTGGACATTTGGTATTTTCTTGCATGAATTACTATATGGCAAAACCCCATTCAAGGGCTCAGGAAACCGAGCTACCCTTTTCAATGTTGTCGGGCAGCAGCTCCGATTTCCTGAATCACCAGCCACCAGTTACGCTAGCAGGGATCTCATTCGGGGGTTGCTGGTAAAGGAACCACAGAACCGTCTTGGTGTGAAGAGGGGTGCTACTGAGATCAAGCAGCATCCATTCTTCGAAGGCGTCAATTGGGCTCTAATTCGATGCAGCACCCCACCAGAAGTTCCAAAACCAGTGGAGCCTGAACTACCTGGGAAGTATGGAGCTGTTGATACAGTTGGGGTTGGTAACAGTAGTAAAAGGATTGTAGGTACTGACATGAAATCTGGAGGTAAATATTTGGACTTTGAGTTCTTCTAG 2280 0.443 MERVPEWKAVPRAMPVLVEVSNGPTTSRRDIGVPPNGRDVSHLRTLPSKDVNQMPKGREITNIHLRSWGEVSHVPNVPMVLVGEDGESCDLNSSPEFDLSTLPRICKGKASLPEHEELMPDVVSFKGSSIDSFEDVGSTSFHGASHPPEPVDIDLMRTVYVPIGQNKSEVACLMKSLSVKGPSLEDISIRPPMKKCIPAVFPPVESLVEVPNDPGTVTSPLSVPRASHITENSLPPESDEKECVWDASLPPSGNVSPHSSIDSTGVVTAMSIVHSCASTYRSDAFTSDGMLSIDRNCDSMKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSAKKPHKGNDPRWNAILSIRARDRILGMSHFRLLKRLGCGDIGSVYLSELSGTRCFFAMKVMDKASLASRKKLTRAQTERDILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVRSAFDSDPSKRGGAFCVQPTCIEPSSACIQPACFIPKIFPQKSKKSRKPRGDPGLSSSALPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPKPVEPELPGKYGAVDTVGVGNSSKRIVGTDMKSGGKYLDFEFF* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00799 759 Gene3D Transferase(Phosphotransferase) domain 1 451 518 - -
Pte1g00799 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Pte1g00799 759 FunFam serine/threonine-protein kinase D6PK-like 451 518 - -
Pte1g00799 759 PANTHER FLIPPASE KINASE 1-RELATED 130 721 - -
Pte1g00799 759 MobiDBLite consensus disorder prediction 218 233 - -
Pte1g00799 759 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Pte1g00799 759 ProSiteProfiles Protein kinase domain profile. 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00799 759 SMART serkin_6 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00799 759 MobiDBLite consensus disorder prediction 218 239 - -
Pte1g00799 759 FunFam serine/threonine-protein kinase D6PK-like 594 717 - -
Pte1g00799 759 MobiDBLite consensus disorder prediction 308 339 - -
Pte1g00799 759 MobiDBLite consensus disorder prediction 303 345 - -
Pte1g00799 759 FunFam Serine/threonine-protein kinase D6PK-like 365 450 - -
Pte1g00799 759 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00799 759 Pfam Protein kinase domain 368 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g00799 759 Gene3D Transferase(Phosphotransferase) domain 1 593 717 - -
Pte1g00799 759 SUPERFAMILY Protein kinase-like (PK-like) 349 721 IPR011009 -
Pte1g00799 759 CDD STKc_phototropin_like 365 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00799 Pte-Chr1 13486076 13491441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00799 1 760 AGC Kinase Gene Family AT2G44830 66.069 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte1g00799 Pkinase 2.2e-36 CL0016