Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00786 ATGCTGGATAAGAGAGATGCACTTGATGCTGTCATCAAAGAGGCTGTTGATCTTGAGAACATTCCCATTGATGAGGTTTTTGAGAATCTAGACTGCACAATTGAGGGTCTTACCGATGAAAAAGTTCAGAAGCGGCTTGCTATGTTTGGATACAACAAGCTTGAAGAGAAGAAGGAAAGCAAAGTATGGAAGTTCTTGGGCTTCATGTGGAACCCTCTGTCATGGGTCATGGAAGCTGCAGCTATCATGGCAATTGCTCTTGCACATGGAGGGGATAAACCAGGAGATTATCAAGATTTTGCAGGAATTATAATTTTACTGATCATCAACTCTACCATCAGTTTCATAGAGGAAAACAATGCTGGCAATGCAGCTTCAGCGCTTATGGCTCGTTTGGCTCCGAAAGCTAAGGTCCTTCGTGATGGAAAATGGAAAGAAATAGATGCTGCTGTCTTGGTTCCAGGAGACATTATTAGCATTAAGCTTGGTGACATTGTACCTGCAGATGCTCGTCTTCTTCAGGGTGATCCTTTGAAAATTGACCAGGCATGTCATTGA 558 0.4283 MLDKRDALDAVIKEAVDLENIPIDEVFENLDCTIEGLTDEKVQKRLAMFGYNKLEEKKESKVWKFLGFMWNPLSWVMEAAAIMAIALAHGGDKPGDYQDFAGIIILLIINSTISFIEENNAGNAASALMARLAPKAKVLRDGKWKEIDAAVLVPGDIISIKLGDIVPADARLLQGDPLKIDQACH* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00786 185 PANTHER CALCIUM-TRANSPORTING ATPASE 19 183 - -
Pte1g00786 185 Gene3D - 96 133 - -
Pte1g00786 185 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 134 IPR023298 -
Pte1g00786 185 SUPERFAMILY Calcium ATPase, transduction domain A 134 183 IPR008250 -
Pte1g00786 185 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Pte1g00786 185 Gene3D - 134 183 - -
Pte1g00786 185 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Pte1g00786 185 Pfam E1-E2 ATPase 132 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00786 Pte-Chr1 13207604 13208498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00786 6 184 Primary Pumps ATPases AT3G60330 75.978 5.26e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00786 K01535 - psom:113281565 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00786 1 13207604 13208498 Pte1g00786 1 13207604 13208498 RCT