Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00785 ATGTTGCAATGTATCTTTCAGTCTGCCCTAACAGGAGAGTCCCTTCCAGTCACTAAAAAACCTGGTGATGGAGTTTATTCTGGTTCAACTTGTAAGCAAGGTGAGATTGAAGCCTTAGTTATAGCTACAGGAGTACACACGTTCTTTGGGAAGGCCGCTCATCTTGTGGAGAACACCACACATGTTGGACATTTCCAACAGGTTTTAACATCGATTGGGAACTTCTGTATATGCTCCATTGCGGTCGGGATGCTAATAGAAATCATCGTCATATATGGAATCCAAAAGAGAGGATACCGGGTTGGAATTGATAATCTTCTTGTTCTGCTCATTGGTGGAATTCCAATTGCAATGCCAACTGTTCTTTCTGTCACAATGGCCATTGGCGCACATCGTCTGGCTCAGCAGGGTGCTATAACAAAAAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTGTTATGCAGCGATAAAACAGGCACATTGACATTGAACAAGCTCACAGTGGACAAGACCTTAATTGAGGTTTTTGCCAAGGGTGTTGACAAGGATTCTGTTGTACTTATGGCTGCAAGAGCATCAAGGTTAGAGAACCAAGATGCCATTGATGGTGCTATAGTTTCAATGTTGTCAGACCCTAAAGAGGCGCGATCTGGGATTCGAGAAGTTCATTTTCTTCCATTCAATCCAACAGATAAAAGAACTGCACTCACATATGTTGATGCAGATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCGGAGCAGATTCTCAATCTGGCTTATAACAAGTCAGACATTGCGAATCGAGTGCATTCAATCATCGACAAGTTTGCAGACCGCGGACTCCGGTCTCTTGCAGTTGCCCGCCAGCAAGTACCAGATGGATCAAAAGATAGTCCTGGAGGACCATGGGAGTTTGTCGGTCTTCTTCCCCTATTTGATCCTCCCAGACATGACAGTGCTGAAACCATCAGAAGAGCTCTTAATCTCGGTGTAAGCGTCAAAATGATTACTGGAGACCAACTGGCAATTGGTAAGGAAACTGGAAGGCGATTAGGAATGGGGAGCAACATGTATCCTTCTTCATCTTTGCTCGGAGAAACTAAGGATGGAAAAGTTCCTGCACTGCCTGTTGATGACCTTATTGAGCAAGCTGATGGCTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAGCAGGCTGCAAGCAAGAAAACACATATGTGGAATGACTGGTGATGGGGTCAATGATGCACCTGCCTTGAAGAAAGCTGACATTGGTATTGCAGTGGCGGATGCTACCGATGCAGCTCGTAGTGCTTCTGATATAGTTTTGACAGAACCTGGGTTGAGTGTAATCATTAGTGCAGTCTTAACAAGTCGTTCAATATTTCAAAGGATGAAAAACTACACGATATATGCCGTGTCGATCACTATACGCATTGTGCTTGGTTTCATGTTGCTCAATGTCTTTTGGAAATTTGACTTCCCTCCTTTCATGGTCCTTGTGATTGCCATTCTAAATGATGGCACCATCATGACCATATCAAAGGATAGGGTCAAGCCATCTCCTGTTCCCGACAGCTGGAGACTAAGTGAAATTTTTGCAACTGGAGTTGTCCTTGGAGGCTACATGGCACTGATGACAGTGATATTCTTCTGGACAGCTTATGAAACAAGCTTCTTTCCAAATTTGGTCTTGTCAGATAAAACTACAGCAGATGAACTTAATGAGAAGATGGCCTCTGCTGTCTATCTTCAAGTTAGTACAATAAGTCAGGCCCTAATTTTTGTTACACGCTCAAGAAGCTGGTCTTTCATAGAGCGACCTGGCCTTCTACTTGTCACTGCCTTCATCCTAGCTCAACTGATTGCCACTGTAATATCTGCCACTTTAACTTGGAAAATGGCTGGAATCAGAAGCATTGGTTGGGGCTGGACTGGGGTCATTTGGTTATTTAACACTGTAACATATTTGCTGCTTGATCCTATAAAATTTTGTGTTCGATATGCATTAAGTGGAAGGGCTTGGAACCTTGTGGTAGACCAAAGAACTGCATTCAATAACCAAAAAGACTTTGGTAAAGAAGCTCGTTCAGCTGCATGGGCAGCTGAGCAGAGAAACTTACATGGTCTTTCATCTGAGCCTAAACAATTAAGTGACCAAAAGGCTTCCAAGAACGTATTAACAATAGCTGAGGAGGCTAAACGACGTGCTGAAATAGCAAGGATAAGAGAGCTCCACACTCTAGAGGGCAAGGCTCAAAATTTTGTCAGGCTACGTGGCCTTGACATTGATGCCATGAACCAGCACTACACTGTCTAA 2337 0.436 MLQCIFQSALTGESLPVTKKPGDGVYSGSTCKQGEIEALVIATGVHTFFGKAAHLVENTTHVGHFQQVLTSIGNFCICSIAVGMLIEIIVIYGIQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKGVDKDSVVLMAARASRLENQDAIDGAIVSMLSDPKEARSGIREVHFLPFNPTDKRTALTYVDADGKMHRVSKGAPEQILNLAYNKSDIANRVHSIIDKFADRGLRSLAVARQQVPDGSKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGETKDGKVPALPVDDLIEQADGFAGVFPEHKYEIVSRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRSIFQRMKNYTIYAVSITIRIVLGFMLLNVFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPVPDSWRLSEIFATGVVLGGYMALMTVIFFWTAYETSFFPNLVLSDKTTADELNEKMASAVYLQVSTISQALIFVTRSRSWSFIERPGLLLVTAFILAQLIATVISATLTWKMAGIRSIGWGWTGVIWLFNTVTYLLLDPIKFCVRYALSGRAWNLVVDQRTAFNNQKDFGKEARSAAWAAEQRNLHGLSSEPKQLSDQKASKNVLTIAEEAKRRAEIARIRELHTLEGKAQNFVRLRGLDIDAMNQHYTV* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00785 778 Gene3D - 7 43 - -
Pte1g00785 778 PRINTS P-type cation-transporting ATPase superfamily signature 310 321 - -
Pte1g00785 778 PRINTS P-type cation-transporting ATPase superfamily signature 156 170 - -
Pte1g00785 778 PRINTS P-type cation-transporting ATPase superfamily signature 6 20 - -
Pte1g00785 778 PRINTS P-type cation-transporting ATPase superfamily signature 332 342 - -
Pte1g00785 778 PRINTS P-type cation-transporting ATPase superfamily signature 415 434 - -
Pte1g00785 778 PRINTS P-type cation-transporting ATPase superfamily signature 438 450 - -
Pte1g00785 778 Pfam E1-E2 ATPase 7 136 - -
Pte1g00785 778 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 676 IPR023298 -
Pte1g00785 778 FunFam ATPase 4 plasma membrane-type 401 644 - -
Pte1g00785 778 NCBIfam HAD-IC family P-type ATPase 6 184 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 NCBIfam HAD-IC family P-type ATPase 390 494 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 FunFam Plasma membrane ATPase 168 315 - -
Pte1g00785 778 ProSitePatterns E1-E2 ATPases phosphorylation site. 158 164 IPR018303 -
Pte1g00785 778 Pfam haloacid dehalogenase-like hydrolase 152 429 - -
Pte1g00785 778 Gene3D - 168 315 IPR023299 GO:0000166
Pte1g00785 778 Gene3D - 44 644 - -
Pte1g00785 778 SFLD p-type atpase 138 466 IPR044492 -
Pte1g00785 778 NCBIfam plasma-membrane proton-efflux P-type ATPase 6 634 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte1g00785 778 SUPERFAMILY HAD-like 152 462 IPR036412 -
Pte1g00785 778 FunFam Plasma membrane ATPase 308 463 - -
Pte1g00785 778 Gene3D - 730 778 - -
Pte1g00785 778 SUPERFAMILY Calcium ATPase, transduction domain A 7 56 IPR008250 -
Pte1g00785 778 PRINTS H+-transporting ATPase (proton pump) signature 589 610 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 PRINTS H+-transporting ATPase (proton pump) signature 387 403 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 PRINTS H+-transporting ATPase (proton pump) signature 272 290 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 PRINTS H+-transporting ATPase (proton pump) signature 446 471 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 PRINTS H+-transporting ATPase (proton pump) signature 415 431 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00785 778 SFLD Haloacid Dehalogenase 138 466 - -
Pte1g00785 778 Gene3D - 153 452 IPR023214 -
Pte1g00785 778 PANTHER CALCIUM-TRANSPORTING ATPASE 6 711 - -
Pte1g00785 778 CDD P-type_ATPase_H 7 670 IPR006534 GO:0008553|GO:0016020|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00785 Pte-Chr1 13202971 13207197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00785 5 779 Primary Pumps ATPases AT5G62670 79.563 0.0 1290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00785 K01535 - pop:18105052 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00785 1 13202971 13207197 Pte1g00785 1 13202971 13207197 RCT