Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00783 CCAAACCTTCCGAAGATCCCACACAAGTACAAGCGCCAAGCAATCCAACAAGCCCAAAAAGCCTTCACAGACTATCTCCATGGTACAAGGTCTTTGCCGTATGCATATGCCGAGCACATTGGCAAGAATTCCATTTTCTCTCTCTGCAACTTAATGTCAAGGTTGGATTTTTCAGCTCCTCGGTTTGTCAGAAACTTCCAGAAGTTCTTAAGGTACAACCCCATCAACGAATTTGAGTTTTTCTTCGAGAGCATCGGCATAGATCGCCATGAGGTCTCTTGGTTTTTGCCTGTGAAGAGGTTCTTCTTGTCTGAAGATGACACTGTTCTGAATGCTGCGTGCGCACTTTCTGATTATGGGTTTCCATGGACTATGCTCGGAATGCTGTATAAGGAGAAAGTTTCGATTTTCAGAACAAGCTCTGAGGAGTTGACTGCCAGGCTTTCTGGGTTTAAGAAACATGGGTTTGAAAATGTTGCTGTAATTGGCATATGTTTGGCTTTTCCTCATTTGTTAACTGTAGAATTTTCTGATTTAGCAAGTTGTATTGAGGGGAATGTAGATTCCTGGTATGATGTCTGTAAAAAGATTAGGGTGTTTTACAAGTTGACTGGTATGAAATGGAAATTAATAGAGCTTATGGGTAAGAGGAAGCATGTTTTTCTCGAAAATGAAGAAGAGGTTTTGATCCAAAAAGCAGAGTATTTCATTAGATTTGGTGTTAATAAGGAGGAAGTTGCTGTGTTGCTTCTACAAGCGCCTGAACTGCTGAAACTTGATATGGAAACGCCAGTAATTTCCGTATTGAAGTTTTTACGTCATTTTGGATTGAGTTCAAAAGAGGTGCAGGATGTCAAGCTAAATTACACACATGTTCTGGGAACAAACCAAATGTGTAATTTGCCTCAAATCATGAGGGCTTTGCATTTACATGAATGGTTCTTGAACAAGATCAAGGAAGGAAAAACAAGGTTGTTGGCTAATTATATTAAACGTCATACTGAAGAAGTACTGAATCAAGAATATAGAGAAGGCTTGGAGCGGGTTCAACTTCAAGAAACCACACATACAATGAGTAAGTTAAAATTCTTGCACGGGATTGGTTTTGGAGAGAACCCTTTGACCATGAAAGGATTAGTTCAATTGCATGGGACAAGCAGCGAGTTACAAGAAAGGTTCGACTGTCTTCTTCATTTAGGGATTGAATTTGCAAAACTGTCAAAGATGGTCAGTATGACTCCGAAGATTTTAAATCAAAAGCCTGAGATTCTAGAACAAAAGTCAAATTTCCTGTGTCAAGAGATGGGGTTATCCTTACACTACCTGGAAACATTCCCAACATTTTTGTGTTTTGATTTGGAGAATAGAATTAAACCTAGGTACAGATTTCACATTTGGCTTGGAAAAATGGGTTTCTGTACAAGGGAGTACTCTATTGCTAGCATAGTTGCTACAAGTGAAAAAGGTTTCATAGCTCGGCTGAAAACTATCCACCCGGATGCTGTTAAATACTGGCTTGATTACACCTCTCTCAGT 1536 0.3958 PNLPKIPHKYKRQAIQQAQKAFTDYLHGTRSLPYAYAEHIGKNSIFSLCNLMSRLDFSAPRFVRNFQKFLRYNPINEFEFFFESIGIDRHEVSWFLPVKRFFLSEDDTVLNAACALSDYGFPWTMLGMLYKEKVSIFRTSSEELTARLSGFKKHGFENVAVIGICLAFPHLLTVEFSDLASCIEGNVDSWYDVCKKIRVFYKLTGMKWKLIELMGKRKHVFLENEEEVLIQKAEYFIRFGVNKEEVAVLLLQAPELLKLDMETPVISVLKFLRHFGLSSKEVQDVKLNYTHVLGTNQMCNLPQIMRALHLHEWFLNKIKEGKTRLLANYIKRHTEEVLNQEYREGLERVQLQETTHTMSKLKFLHGIGFGENPLTMKGLVQLHGTSSELQERFDCLLHLGIEFAKLSKMVSMTPKILNQKPEILEQKSNFLCQEMGLSLHYLETFPTFLCFDLENRIKPRYRFHIWLGKMGFCTREYSIASIVATSEKGFIARLKTIHPDAVKYWLDYTSLS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00783 512 PANTHER CGI-12 PROTEIN-RELATED 138 494 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 FunFam Transcription termination factor MTEF18, mitochondrial 346 505 - -
Pte1g00783 512 Gene3D Transcription termination factor 3, mitochondrial 348 506 IPR038538 -
Pte1g00783 512 Gene3D Transcription termination factor 3, mitochondrial 48 186 IPR038538 -
Pte1g00783 512 Gene3D Transcription termination factor 3, mitochondrial 187 340 IPR038538 -
Pte1g00783 512 SMART mt_12 127 157 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 SMART mt_12 407 438 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 SMART mt_12 439 473 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 Pfam mTERF 200 296 IPR003690 GO:0003690|GO:0006355
Pte1g00783 512 Pfam mTERF 381 490 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00783 Pte-Chr1 13110586 13112180 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte1g00783 mTERF 8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00783 - - jre:109016414 665.611