Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00782 ATGTCGACTCAGGGAAGTCAACCACCACCGTTCGAGACCACCAAGTACTACTGCACTGTCATCGATGCCCCCGGACATCGTGACTTTATCAAGAATATGATCACTGGAACATCTCAGGCTGACTGTGCCGTCCTCATCATCGATTCCACAACTAGTGGATTTGAAGCCGGTATTTCCAAGGATGGTCAAACTCGTGAGCATGCTCTGCTTGCATTCACCCTCGATGGATGCCACCACTCCCAAGCCCAGGCAGCTTTGCAATCACTGGGATGGGAAAGTGTGGAGGAGAATTGTGAGATGGAGGAGGTAAAATCAAAAACAGATTGTTATGGGTAG 336 0.494 MSTQGSQPPPFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTSGFEAGISKDGQTREHALLAFTLDGCHHSQAQAALQSLGWESVEENCEMEEVKSKTDCYG* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00782 111 PANTHER TRANSLATION FACTOR 11 74 - -
Pte1g00782 111 Gene3D - 2 81 IPR027417 -
Pte1g00782 111 Pfam Elongation factor Tu GTP binding domain 11 74 IPR000795 GO:0003924|GO:0005525
Pte1g00782 111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 75 IPR027417 -
Pte1g00782 111 PRINTS GTP-binding elongation factor signature 19 29 IPR000795 GO:0003924|GO:0005525
Pte1g00782 111 PRINTS GTP-binding elongation factor signature 35 46 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00782 Pte-Chr1 13108131 13109784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00782 11 74 Eukaryotic Initiation Factors Gene Family AT1G07930 98.438 1.28e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00782 K03231 - ath:AT5G60390 131.339