Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00773 ATGCCTCCCGTTGCCGGAAGGTATTCAACCACCAAGTCCACCACCGCCACTACTATGACAACTGCTATTCCGTCCCCTAATGGGCACCATCAATCCAAAGAAGTGGTCCCGGACGCAACTATGCCAACTGCTAGCATCGTCAACTGTACTCCTCGGAAGCGCAATCTGAGATCCATTTCTTCTACTGCCGGAGCCAATACAGATGAGGGGGCCACTATTTCTCCGGTCAAATCGAAATCTCCTCGGCTTTGCTGTGTTAGCCCCAGTGGAACCGACATGGTATCAACTGAAAAACACATGATTTCACGTACATCGGCAAAGAGGTTATCTGACTGTTTACTTGATGAACCAAAATGGAATCCCAGAGATAGCGAGCACATGAGGTCTGTGAAAGAGGCACTGCATGTGTCAACTTTGCCTTCTAAAATTGTGTGTCGCGAGGAAGAGCAGAAGAGGGTTTTGGAGTTCTGTAAGGAGTGTATCGAGCAAGAAAAGTCTGGTAGTTTGTACGTATGTGGCTGTCCTGGGACTGGGAAATCATTGTCCATGGATAAAGTGAAACAACTTTTGCTTAATTGGGCCGAAGAGGGAGGTTATCAGCAACCAGAAATTTTAGCGATAAACTGTACTTCTTTGATTGATACATCTAACATTTTCAGCAAGTTGCTTGGACTGAATCAATCACAGAAGAAAGTTAATGGTTCCATCTCCCCCTTGCAGCATCTTCAGAAATTATATTCTCAAAAGCCATCGTCATCAACCATGAACATGAAATTAGTTCTTGCTGATGAATTGGATTATCTAATTACAAAAGACAGAGCTGTGCTTCATGAACTTTTCATGCTTACAACCTTGCCATTTTCGAGGTTCATTTTAATAGGGATTGCAAATGCTATAGACTTGGCAGATCGTTTTCTTCCAAGGCTTAAGTCATTGAATTGCAAGCCTGCAGTTGTAGCTTTTCGGGCTTACACTAAAGATCAGATACTTAAGATTCTAGAGGAGAGGCTTTCGGAACATCCTTATTCTGTTTTCCAACATCAAGCTTTGGAGTTATGTGCCAGGAAAGTTGCTGCTGCTTCTGGAGATATGCGAAAAGCCCTTGGCATATGCAGGACTGCAATAGAGATTCTAGAAGCAGAAATTCGAGAGTCAATATCAGAAAAATCACTATCTTGTGAAGAACAGACAGAATCTGCTGCTTACAGGAGAAAACTAGACTCAGATGTTGTTAGGATTGATCACATGGTTGTTGCTCTGTCAAAGACATTCAGGTCGCCTGTGGTAGATACCATACAGTCTCTCCCACACCATCAGCAAATAATACTTTGTTCCATCGTGAAATACTTACGAGGTGGAAAGAAACATGCAACACTTGGGGAGTTGAACAAATCTTACTTGGAATCCTGCAAATCAGCATCGATGCCAGCAGTTGGTATCCTGGAGTTTTCAAATATGTGCGGAGTGTTAAATGACCAGGGATTTCTTAAAGTAGGTCATTCTAGAGAAGATAAACTGAGAAGAATAGCCTTAAAAGTGGATGAAGCTGATATAACCTTCGCATTACAGGGATCCCGTTTTTTCCAGAACTTTCTTCAATAA 1602 0.4251 MPPVAGRYSTTKSTTATTMTTAIPSPNGHHQSKEVVPDATMPTASIVNCTPRKRNLRSISSTAGANTDEGATISPVKSKSPRLCCVSPSGTDMVSTEKHMISRTSAKRLSDCLLDEPKWNPRDSEHMRSVKEALHVSTLPSKIVCREEEQKRVLEFCKECIEQEKSGSLYVCGCPGTGKSLSMDKVKQLLLNWAEEGGYQQPEILAINCTSLIDTSNIFSKLLGLNQSQKKVNGSISPLQHLQKLYSQKPSSSTMNMKLVLADELDYLITKDRAVLHELFMLTTLPFSRFILIGIANAIDLADRFLPRLKSLNCKPAVVAFRAYTKDQILKILEERLSEHPYSVFQHQALELCARKVAAASGDMRKALGICRTAIEILEAEIRESISEKSLSCEEQTESAAYRRKLDSDVVRIDHMVVALSKTFRSPVVDTIQSLPHHQQIILCSIVKYLRGGKKHATLGELNKSYLESCKSASMPAVGILEFSNMCGVLNDQGFLKVGHSREDKLRRIALKVDEADITFALQGSRFFQNFLQ* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00773 533 Pfam AAA domain 165 284 IPR003593 GO:0016887
Pte1g00773 533 Pfam AAA lid domain 346 380 IPR041083 -
Pte1g00773 533 Pfam CDC6, C terminal winged helix domain 443 521 IPR015163 -
Pte1g00773 533 FunFam Cell division control protein 313 432 - -
Pte1g00773 533 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 96 530 - -
Pte1g00773 533 MobiDBLite consensus disorder prediction 1 34 - -
Pte1g00773 533 FunFam Cell division control protein 124 312 - -
Pte1g00773 533 PIRSF Cdc6 4 533 IPR016314 GO:0006270|GO:0051301
Pte1g00773 533 Gene3D - 123 312 IPR027417 -
Pte1g00773 533 Gene3D - 313 431 - -
Pte1g00773 533 MobiDBLite consensus disorder prediction 7 28 - -
Pte1g00773 533 SUPERFAMILY "Winged helix" DNA-binding domain 428 531 IPR036390 -
Pte1g00773 533 SMART Cdc6_C_2 443 522 IPR015163 -
Pte1g00773 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 389 IPR027417 -
Pte1g00773 533 Gene3D - 432 522 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00773 Pte-Chr1 12680206 12686223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00773 1 532 Core DNA Replication Machinery Family AT2G29680 54.766 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00773 K02213 - qsa:O6P43_020029 632.484