Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00758 ATGAAGGGCTTGCCCTCACCCATTGAGCAATTTAGAGGGAAGGGGGTGTTAGAATTTGGTTCAGCTTCAGATTCATTTTCATATCTTCAACAGCAGCAGCTCCCACAGAAGTGGACCACCATTGAAGAGCATTGCTATGTGGGCAGTGAGCCGACCTCTGTACTTGATATCACAAGTAATAACACAAGTCCTCCTGCTTCTTCCTCCACACTGTCTTCATCTCACGGCAGTACAGGGGTCTGCAACGGCTGCGGCTGCGGCTCCACCGATAGCACCCCCGGTGTTGCCCTGACGACTACGACCTCTGATAACCCAACGTCGACGAGAACTGTACATACTGGTTGTTTTAGCATAGCACGTACTGGTGCAGAAAAATGCGGCATGGGATTGGAGGACTGGAGGAGTGTCTTACCTGAGTCACCTGGTCAAGATCAGTCCATTTTGAGATTGATTATGGGTGACATTGAAGACCCATCGGTTGGTTTGAGCAAGCTGTTGCAAGGTGGAGGAGGTGATGGTGGTTCTGATTCTCAGAATGTTGAATTCACTGCAGGTTTTGGAGTCATGGATCAAGCTTTTGTTCCTGTAACTGAGGTACCCATTACGAGTGAGAATTGGGTGAGTGACATTGATCCTTGTGCTGCCACAAATTGTGTTGAGTTCCCCTTCAATTCGCAGAATGCTAATGGCAACAACACCAGGTTTGGGTCAGCTGCAAATCTGAACCCCATGTTTACTGCTTCAGCTAGTGGGATGAGTCCTGTTTCGGTTCCTCCTAGCGTGTTTCATCATTATCAACAAAAAGTTGACGCTGTGGATGAGAAGCCACAAGAGTCGAGCACCTATTTGATGATAAACCAGAATCAAACTCAGTTCACACAGAATCCAGCTTTTTTTATGCCTATGACATATGCACACCTGCAAGAGCATCAGCTTCTTTCTCAGCCGCCAACTAAAACACTTAACCCTGGTACAACTGGGCAGGGTTATCAGGTCCCAAATGTTCCGTTTTTGGATTCGGGGCAAGAGTTTTTACTTCGAAGGCAGCAACAGCAACAACAGGTTCAATTGCTTCCCCATCATCTGCAACAACTGTCATCGGTGCCGGTACCGCCTAAGCAGAAAATGGTGAGTCCCGGCGAAGATTTGGCGACCCACCAGTTTCAGCAGGCTATAATTGACCAGCTTTTCAAGGCAGCAGAGCTGATTGAAGCTGGTAATGAAGTACTCGCGCATGGGATATTGGCGCGGCTCAATCACCAACTCTCCCCAATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTACATGAAGGAGGCATTGCAATTGCTTCTACGTGCAAGTACAAGTAATTCTCTTGTATTCTCACCAATTAGTCTCATTTTCAAGATTGGTGCTTACAAGTCATTTTCAGAGATCTCTCCAATTCTTCAGTTCGCAAATTTCACTTGTAACCAAGCTTTGCTTGAATCTGTGGAAGGGTTTGACCGGATTCACGTCATTGACTTTGATATTGGCTTTGGTGGTCAGTGGGCTTCTTTTATGCGAGAGCTAGCATTGAGAAATGGCGGTGCACCTCACCTTAAAATTACTGCTTTTGCGTTTCCTTCTGCTCATAATGAAATTGAGCTTGCTTTCACTCAAGAAAATCTTAAGGAGTCCTTCGATTTGTGA 1671 0.4626 MKGLPSPIEQFRGKGVLEFGSASDSFSYLQQQQLPQKWTTIEEHCYVGSEPTSVLDITSNNTSPPASSSTLSSSHGSTGVCNGCGCGSTDSTPGVALTTTTSDNPTSTRTVHTGCFSIARTGAEKCGMGLEDWRSVLPESPGQDQSILRLIMGDIEDPSVGLSKLLQGGGGDGGSDSQNVEFTAGFGVMDQAFVPVTEVPITSENWVSDIDPCAATNCVEFPFNSQNANGNNTRFGSAANLNPMFTASASGMSPVSVPPSVFHHYQQKVDAVDEKPQESSTYLMINQNQTQFTQNPAFFMPMTYAHLQEHQLLSQPPTKTLNPGTTGQGYQVPNVPFLDSGQEFLLRRQQQQQQVQLLPHHLQQLSSVPVPPKQKMVSPGEDLATHQFQQAIIDQLFKAAELIEAGNEVLAHGILARLNHQLSPIGKPFQRAAFYMKEALQLLLRASTSNSLVFSPISLIFKIGAYKSFSEISPILQFANFTCNQALLESVEGFDRIHVIDFDIGFGGQWASFMRELALRNGGAPHLKITAFAFPSAHNEIELAFTQENLKESFDL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00758 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 350 552 IPR005202 -
Pte1g00758 556 Pfam GRAS domain family 393 552 IPR005202 -
Pte1g00758 556 ProSiteProfiles GRAS family profile. 383 556 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00758 Pte-Chr1 11372934 11375435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00758 371 552 GRAS Transcription Factor Family AT4G00150 60.870 5.31e-60 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g00758 GRAS 4.9e-47 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00758 - - qsa:O6P43_017387 657.907