Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00751 ATGTCGGCCTCAGCTACTTCTTTTCCTCCGGATCATCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCAGTGAGTGTTCCTTGCACTAGCTTGTTCAAGACTGTGACAGTGAGATGTGGCCATTGCTCCAACCTATTGTCTGTCAACATGCGAGGGCTGTTTCTTCCAGCTGCTCCTAACCAGCTTCACTTTGGCCATTCATTCTTCACTCCGCAAAATCTCCTGGAAGAGATCCGAAGTGCACCATCGTCAAACATGCTTATCAATCAGCTTCCTGTCCCAAATGATACAGTTTTGCCGGTTCGTGGAGGACCTGAGGACATCCCTAAATCTTCTGCCACTATTAACAAACCTCCGGAGAAGAGACAGCGAGTCCCATCTGCATACAACCGCTTCATTAAGGAAGAGATTCAGCGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTCAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGACCATCAACCCGTGAAGAAACCCAATTTGCGCCAGGAAGGAGAGGATGTGCTCATGAAAGATGGATTTTTCAGTACTACTGCAGCAGCAAACGTGGGTATCTCTCCATATTGA 660 0.4848 MSASATSFPPDHHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGLFLPAAPNQLHFGHSFFTPQNLLEEIRSAPSSNMLINQLPVPNDTVLPVRGGPEDIPKSSATINKPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKPNLRQEGEDVLMKDGFFSTTAAANVGISPY* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00751 219 CDD HMG-box_SF 134 170 - -
Pte1g00751 219 FunFam Axial regulator YABBY 125 197 - -
Pte1g00751 219 PANTHER PROTEIN YABBY 6-RELATED 5 190 IPR006780 GO:0007275
Pte1g00751 219 Gene3D High mobility group box domain 119 175 IPR036910 -
Pte1g00751 219 Pfam YABBY protein 16 180 IPR006780 GO:0007275
Pte1g00751 219 SUPERFAMILY HMG-box 120 174 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00751 Pte-Chr1 11231796 11234941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00751 27 217 C2C2-YABBY Transcription Factor Family AT4G00180 58.962 3.79e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte1g00751 YABBY 6.2e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00751 K25796 - gmx:100781267 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00751 1 11231796 11234941 Pte1g00751 1 11231796 11234941 RCT